Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012388.1 Kokia drynarioides strain JFW-HI SEQ_127392, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57957

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1576--1616
2
20.5
2
100
0
82
51
0
0
48
1.00
4669--4726
30
1.9
30
93
6
100
39
17
5
37
1.72
9537--9584
22
2.2
22
84
0
60
41
0
2
56
1.11
10623--10714
37
2.4
39
85
7
127
52
4
0
43
1.21
12624--12686
22
2.9
22
71
15
58
41
7
1
49
1.42
17085--17128
21
2.1
21
83
8
54
50
2
2
45
1.27
21436--21485
17
2.7
20
78
12
61
44
0
0
56
0.99
23776--23835
31
1.9
32
86
10
88
50
5
15
30
1.65
23817--23876
25
2.3
26
81
13
72
61
5
3
30
1.33
26316--26355
21
1.9
19
85
14
53
42
0
10
47
1.37
27493--27549
24
2.4
24
87
0
78
21
19
26
33
1.97
27508--27558
24
2.1
24
96
0
93
21
19
25
33
1.97
28120--28177
21
2.5
24
78
15
70
22
5
29
43
1.75
32226--32250
2
12.5
2
100
0
50
52
0
0
48
1.00
35938--35994
29
2.0
27
83
12
71
43
0
0
56
0.99
44856--44882
3
9.0
3
100
0
54
0
33
0
66
0.92
45034--45067
16
2.0
17
88
11
52
61
2
0
35
1.11
48632--48686
26
2.2
25
86
3
74
69
10
9
10
1.38

Tables:   1

The End!