Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012391.1 Kokia drynarioides strain JFW-HI SEQ_127395, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  125583

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
440--494
29
2.0
27
89
7
83
50
5
0
43
1.25
2128--2160
16
2.0
17
88
5
50
57
0
0
42
0.98
2641--2767
63
2.0
63
96
0
236
26
20
14
38
1.91
3556--3619
31
2.1
31
90
0
101
42
15
12
29
1.84
21144--21172
3
9.7
3
100
0
58
65
34
0
0
0.93
32823--32851
2
15.0
2
92
7
51
48
0
0
51
1.00
44792--44981
94
2.0
94
97
0
362
45
18
14
21
1.85
50403--50614
105
2.0
105
85
0
289
42
21
12
23
1.87
63237--63310
31
2.4
33
77
13
84
39
16
6
37
1.75
81450--81475
5
5.2
5
100
0
52
80
19
0
0
0.71
88285--88345
6
10.3
6
77
10
63
44
0
3
52
1.17
88252--88345
17
5.4
17
78
8
91
40
1
6
52
1.34
88252--88345
35
2.7
35
81
6
93
40
1
6
52
1.34
88411--88486
36
2.1
36
95
0
134
44
21
10
23
1.83
89061--89147
12
7.1
12
73
10
68
52
6
4
35
1.49
89154--89205
16
3.2
16
78
5
52
61
0
0
38
0.96
90301--90502
29
7.0
29
79
8
182
34
27
1
36
1.66
90287--90592
57
5.3
58
76
12
236
34
25
2
36
1.71
90279--90501
28
7.8
28
77
11
159
35
26
2
35
1.69
90315--90592
29
9.5
30
72
12
152
34
25
2
37
1.71
94256--94348
32
2.6
35
79
15
111
30
13
17
38
1.89
100662--100686
3
8.3
3
100
0
50
68
32
0
0
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
115597--115656
31
1.9
32
89
3
95
50
8
5
36
1.55
118373--118484
48
2.3
48
93
0
197
32
22
22
23
1.98
125137--125191
27
2.0
27
89
6
85
32
21
34
10
1.89
125367--125452
4
21.2
4
79
11
77
63
0
36
0
0.94
125367--125452
17
5.3
17
78
13
92
63
0
36
0
0.94
125366--125445
20
3.9
20
87
8
108
62
0
37
0
0.95

Tables:   1

The End!