Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012394.1 Kokia drynarioides strain JFW-HI SEQ_127398, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  142516

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1456--1747
30
9.9
30
82
8
334
32
28
4
34
1.78
1456--1747
58
5.0
59
84
5
351
32
28
4
34
1.78
2899--2967
21
3.4
20
72
16
70
59
5
2
31
1.36
26311--26364
18
3.2
16
80
12
54
33
3
5
57
1.40
26569--26615
16
2.8
17
83
6
51
55
0
2
42
1.12
32653--32693
21
1.9
22
90
5
66
36
0
0
63
0.95
47876--47999
11
11.6
11
70
10
53
7
3
20
68
1.28
47879--47956
22
3.5
22
77
16
79
6
2
20
70
1.21
47879--47956
12
6.8
12
71
10
56
6
2
20
70
1.21
74755--74791
16
2.2
17
90
9
58
56
0
0
43
0.99
74755--74798
14
2.9
16
80
13
56
54
0
0
45
0.99
79831--79882
23
2.2
22
83
16
61
59
5
0
34
1.21
79823--79882
25
2.4
26
76
21
65
56
6
0
36
1.26
85657--85681
7
3.6
7
100
0
50
12
0
0
88
0.53
85841--85883
10
4.3
10
85
8
61
60
0
2
37
1.10
85820--85883
29
2.2
31
83
8
80
64
0
1
34
1.03
85841--85898
21
2.9
19
81
18
66
60
0
1
37
1.07
86076--86127
9
6.0
8
83
16
68
26
1
0
71
0.97
86075--86133
18
3.3
18
85
7
84
27
1
0
71
0.96
86071--86160
36
2.5
35
83
7
110
27
2
1
68
1.08
86071--86133
10
6.7
10
80
14
71
28
1
0
69
0.97
86423--86474
24
2.1
26
86
10
74
57
5
0
36
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89655--89755
31
3.4
30
76
13
111
25
20
10
42
1.85
89677--89728
26
2.0
25
88
3
77
25
23
7
44
1.79
93762--93896
57
2.3
57
84
5
182
50
1
1
46
1.19
99823--99875
25
2.2
24
83
6
63
54
1
3
39
1.29
99584--99917
150
2.2
148
86
4
440
44
7
5
42
1.55
100362--100399
18
2.1
18
85
9
51
73
0
5
21
1.02
100369--100403
12
2.9
12
86
0
52
71
0
5
22
1.07
102354--102402
24
2.0
24
100
0
98
36
16
24
22
1.94
102605--102658
28
1.9
27
81
7
63
33
7
1
57
1.37
109920--109948
15
2.0
15
93
6
51
62
0
0
37
0.96
110107--110146
20
2.0
21
85
5
55
45
2
7
45
1.45
116437--116461
2
12.5
2
100
0
50
48
0
0
52
1.00
118703--118731
13
2.1
14
93
6
51
79
3
0
17
0.87
119813--119846
17
2.0
17
88
0
50
8
38
23
29
1.85
121854--121890
16
2.2
18
85
9
51
72
0
10
16
1.10
122494--122526
15
2.3
15
89
5
50
33
9
6
51
1.58
122600--122761
60
2.7
61
76
10
145
41
13
4
40
1.64
125876--125902
13
2.1
13
100
0
54
44
7
0
48
1.31
127465--127510
2
23.5
2
86
4
67
52
0
47
0
1.00
130585--130627
6
7.2
6
81
0
50
16
34
4
44
1.68
134112--134146
18
2.0
18
94
5
63
54
0
5
40
1.24
134761--134834
28
2.6
29
78
4
87
45
8
4
41
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
134966--135001
6
6.0
6
100
0
72
83
0
0
16
0.65
138780--138837
29
2.0
29
96
0
107
36
24
8
31
1.85
140900--140955
25
2.4
24
88
8
80
42
23
23
10
1.85
141139--141179
21
2.0
21
85
9
57
48
12
0
39
1.41

Tables:   1

The End!