Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012395.1 Kokia drynarioides strain JFW-HI SEQ_127399, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  119698

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4616--4644
12
2.5
12
94
5
51
6
0
37
55
1.27
4757--4781
7
3.6
7
100
0
50
44
0
0
56
0.99
4765--4848
16
5.1
16
75
12
71
36
1
5
55
1.32
4765--4841
34
2.3
35
84
8
106
35
1
6
57
1.33
6768--6921
29
5.3
29
84
6
168
32
25
3
38
1.74
6768--6922
58
2.7
57
82
6
186
32
25
3
38
1.74
6945--7135
97
2.0
98
90
3
305
27
15
17
39
1.89
15123--16070
39
24.3
39
70
9
466
24
30
19
25
1.98
15123--16070
117
8.1
116
73
8
598
24
30
19
25
1.98
16526--16586
17
3.6
17
80
2
79
32
1
8
57
1.38
16992--17041
25
2.0
25
84
7
66
56
20
10
14
1.66
17435--17469
17
2.1
17
89
10
54
71
0
0
28
0.86
17682--17732
22
2.3
22
93
0
84
27
23
21
27
1.99
18453--18524
30
2.4
30
83
0
90
36
23
2
37
1.70
18474--18615
29
4.9
29
77
7
112
34
26
2
36
1.71
18563--18615
27
1.9
28
88
3
81
32
32
1
33
1.69
29783--29829
24
2.0
24
84
12
62
27
12
8
51
1.69
36985--37022
10
3.5
11
82
10
51
86
7
5
0
0.69
38537--38583
24
2.0
23
83
4
58
27
10
6
55
1.58
40883--40986
27
3.9
27
79
5
102
30
21
18
29
1.97
43641--43715
37
2.1
37
87
2
107
29
10
5
54
1.57
43969--44196
114
2.0
113
98
0
438
28
12
24
34
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51007--51075
27
2.6
27
100
0
138
46
20
10
23
1.80
57005--57284
38
7.4
38
76
8
212
17
16
24
42
1.89
57017--57284
113
2.4
114
83
2
315
17
16
23
41
1.89
57026--57300
151
1.8
151
81
4
340
17
16
25
40
1.90
62317--62584
38
7.1
38
79
5
236
16
17
25
40
1.90
62317--62595
114
2.4
113
83
2
317
17
17
25
39
1.92
64197--64229
12
2.8
12
95
0
57
75
0
9
15
1.03
67380--67420
12
3.3
12
86
3
55
73
2
9
14
1.19
67385--67419
17
2.1
17
89
10
54
77
0
5
17
0.96
71873--71905
12
2.8
12
95
0
57
75
0
9
15
1.03
73751--73797
21
2.2
21
82
14
53
17
8
10
63
1.49
89996--90028
17
1.9
17
88
11
50
72
3
6
18
1.18
102175--102217
22
2.0
22
86
9
61
37
0
13
48
1.43
106194--106259
33
2.0
33
85
5
89
34
7
22
34
1.83
108117--108162
19
2.4
20
75
17
53
8
15
2
73
1.16
112984--113022
12
3.2
12
82
13
53
69
7
0
23
1.14
117136--117165
14
2.1
14
93
0
51
10
13
13
63
1.52

Tables:   1

The End!