Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012421.1 Kokia drynarioides strain JFW-HI SEQ_127425, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  107265

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2346--2414
19
3.7
19
75
11
63
71
2
0
26
1.00
2344--2415
28
2.6
27
88
4
99
69
2
0
27
1.02
2532--2564
16
2.0
17
88
5
50
72
0
6
21
1.05
2675--2728
19
2.8
19
75
5
56
29
5
1
62
1.28
4348--4411
31
2.1
31
82
11
78
64
0
0
35
0.94
7870--8194
162
2.0
161
84
3
420
29
19
20
30
1.97
8381--8489
55
2.0
55
94
0
191
46
11
8
33
1.69
17004--17050
12
3.7
12
86
11
58
34
0
10
55
1.35
17302--17351
20
2.4
21
81
15
52
48
0
10
42
1.37
33237--33277
16
2.4
17
81
18
50
36
4
0
58
1.20
41253--41436
91
2.0
91
98
0
359
35
16
16
30
1.91
43371--43560
98
1.9
97
80
8
215
50
2
6
40
1.43
43873--43903
1
31.0
1
100
0
62
0
0
0
100
0.00
53040--53090
3
17.0
3
100
0
102
66
0
0
33
0.92
57642--57675
6
5.7
6
85
0
50
82
2
2
11
0.89
67096--67121
4
6.5
4
100
0
52
26
0
0
73
0.84
67478--67521
19
2.4
19
81
14
56
34
2
4
59
1.30
69402--69753
102
3.5
102
85
2
424
26
25
25
22
2.00
70070--70434
131
2.8
132
91
0
581
40
17
3
37
1.68
79190--79396
101
2.0
105
82
8
253
40
16
17
26
1.90
90476--90505
11
2.6
12
89
10
53
43
23
6
26
1.78
98214--98300
34
2.6
34
98
0
165
51
5
25
17
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
99454--99478
5
5.0
5
100
0
50
40
0
60
0
0.97

Tables:   1

The End!