Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012426.1 Kokia drynarioides strain JFW-HI SEQ_127430, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  120760

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1478--1526
25
2.0
24
88
4
71
40
10
0
48
1.37
2892--2927
18
1.9
18
88
5
54
55
13
0
30
1.39
6057--6108
20
2.6
19
80
14
61
44
0
9
46
1.36
16634--16679
15
3.1
15
82
17
69
26
10
2
60
1.41
16632--16676
14
3.1
14
82
17
65
24
8
2
64
1.34
22637--22670
16
2.1
16
88
0
50
11
0
17
70
1.16
25150--25196
21
2.1
23
84
11
71
74
0
10
14
1.07
25151--25210
22
2.8
22
87
7
79
73
1
10
15
1.17
26011--26053
19
2.3
19
84
8
52
58
4
0
37
1.19
38264--38292
14
2.1
14
100
0
58
41
6
27
24
1.80
52382--52414
16
2.0
17
88
5
50
48
0
0
51
1.00
54960--55216
118
2.2
118
90
0
399
42
6
10
40
1.64
66404--66446
15
2.7
15
85
7
59
37
2
0
60
1.10
75846--76563
182
4.0
180
80
5
788
33
11
20
34
1.88
78403--78499
50
1.9
50
95
0
176
32
15
20
30
1.94
85103--85215
53
2.1
53
95
1
199
42
22
5
30
1.75
85442--85480
2
19.5
2
100
0
78
51
0
0
48
1.00
94042--94084
15
2.9
15
82
0
59
32
16
0
51
1.45
97238--97262
10
2.5
10
100
0
50
64
8
0
28
1.22
113410--113440
16
1.9
16
100
0
62
41
32
19
6
1.77
120701--120736
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!