Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012428.1 Kokia drynarioides strain JFW-HI SEQ_127432, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38684

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
281--305
13
1.9
13
100
0
50
56
0
4
40
1.18
11848--11999
30
5.1
30
77
6
123
32
5
26
35
1.81
11848--11995
60
2.5
60
76
11
162
32
6
25
36
1.80
12735--12765
16
2.0
16
93
6
55
70
0
6
22
1.09
13325--13476
24
6.3
24
83
0
178
34
15
21
28
1.94
15138--15237
17
5.9
16
72
20
62
60
3
4
33
1.31
15163--15270
53
2.0
53
83
13
134
58
2
2
36
1.27
15100--15284
71
2.6
70
80
9
207
58
2
3
34
1.30
15111--15276
19
9.4
18
70
18
100
59
2
3
34
1.28
15119--15284
18
9.3
19
68
19
74
59
2
3
35
1.26
15356--15408
12
4.2
12
79
11
52
20
1
43
33
1.63
15356--15399
6
7.0
6
82
7
52
20
2
45
31
1.64
16006--16051
23
2.0
22
84
16
58
32
0
8
58
1.28
20202--20318
35
3.4
33
72
18
96
57
2
5
35
1.35
20264--20349
35
2.5
32
76
14
84
56
3
3
36
1.33
20202--20400
68
2.8
69
78
12
192
55
2
5
36
1.35
21969--22019
25
2.0
25
88
0
75
35
13
19
31
1.91
29022--29057
13
2.8
13
82
0
54
63
2
0
33
1.08

Tables:   1

The End!