Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012460.1 Kokia drynarioides strain JFW-HI SEQ_127464, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  151180

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11177--11201
2
12.5
2
100
0
50
48
0
0
52
1.00
18562--18596
17
2.1
17
100
0
70
42
22
5
28
1.76
24963--25132
52
3.3
52
79
8
166
29
15
24
30
1.96
27890--27935
15
3.1
15
81
12
58
73
2
2
21
1.04
30278--30307
13
2.3
13
94
0
51
23
36
6
33
1.81
35695--35769
36
2.1
36
100
0
150
60
17
8
14
1.58
39509--39704
52
3.8
52
87
1
223
25
14
26
34
1.94
44013--44056
22
2.0
22
100
0
88
36
9
27
27
1.87
44534--44572
17
2.3
17
86
0
51
46
23
12
17
1.83
53899--53924
6
4.3
6
100
0
52
15
19
46
19
1.85
54583--54626
22
2.0
22
82
8
54
43
11
4
40
1.61
60447--60490
22
2.0
22
82
8
54
43
11
4
40
1.61
68474--68549
28
2.7
28
95
0
143
52
5
5
36
1.47
68357--68622
142
1.9
143
97
0
507
40
8
7
43
1.63
81203--81357
18
8.6
18
79
5
134
29
26
20
23
1.99
81185--81356
36
4.8
36
80
5
170
30
25
19
25
1.98
81191--81357
54
3.1
53
80
2
183
30
25
19
24
1.98
83317--83632
158
2.0
158
98
0
605
38
23
12
25
1.90
92918--93027
40
2.8
40
81
5
116
34
29
13
22
1.93
101060--101097
18
2.1
18
85
9
51
63
10
5
21
1.46
106821--106864
23
2.0
23
90
4
72
65
15
6
11
1.44
109947--110047
53
1.9
53
93
0
175
16
9
17
55
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110346--110386
20
2.0
20
95
0
73
39
7
14
39
1.74
118614--118682
6
11.5
6
87
0
66
15
20
36
27
1.93
118614--118670
24
2.4
24
87
0
78
12
21
36
29
1.90
123512--123550
6
6.5
6
88
11
62
46
33
20
0
1.51
124413--124442
14
2.1
14
93
0
51
40
16
6
36
1.75
125891--126239
52
6.7
52
91
0
563
35
24
14
26
1.93
125926--126007
26
3.2
26
64
19
71
37
21
10
29
1.88
129342--129376
14
2.6
14
90
4
54
45
14
2
37
1.59
130285--130350
27
2.5
26
83
9
73
40
4
1
53
1.31
131280--131368
31
2.8
31
82
1
115
38
2
2
57
1.24
132815--132851
18
2.1
18
95
5
67
59
0
5
35
1.20
132826--132860
17
2.1
17
88
0
52
65
2
2
28
1.21
134080--134104
13
1.9
13
100
0
50
48
8
4
40
1.51
138661--138714
16
3.7
15
75
18
51
53
7
1
37
1.40
138662--138714
15
3.6
14
78
14
54
54
7
1
35
1.40
142144--142171
14
2.0
14
100
0
56
42
35
0
21
1.53
144700--144792
46
2.0
46
97
0
177
29
26
10
33
1.90
150139--150178
21
2.0
21
85
5
55
47
2
0
50
1.14

Tables:   1

The End!