Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012465.1 Kokia drynarioides strain JFW-HI SEQ_127469, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29962

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
393--424
16
2.0
16
93
0
55
18
59
0
21
1.38
605--644
20
2.0
20
85
9
55
22
30
0
47
1.52
765--808
18
2.4
19
84
3
54
47
0
6
45
1.29
766--809
19
2.4
18
84
3
52
47
0
6
45
1.29
3277--3490
114
1.9
114
84
1
286
24
24
15
35
1.94
3388--3945
188
3.0
188
85
2
746
25
25
17
31
1.97
3384--3866
95
5.1
96
68
13
336
25
25
17
32
1.97
3439--3942
93
5.4
92
69
12
274
24
25
17
31
1.97
4051--4335
49
5.8
48
78
9
236
19
23
18
38
1.93
4041--4291
98
2.6
98
84
0
295
21
21
17
39
1.92
4069--4323
98
2.6
97
79
6
271
19
24
17
38
1.93
4942--4980
20
2.0
20
85
10
53
7
7
0
84
0.77
5784--5813
14
2.1
14
93
0
51
0
10
3
86
0.67
9789--9835
23
2.0
23
88
8
69
59
0
12
27
1.34
9904--10023
60
2.0
60
83
4
154
58
2
15
23
1.50
11111--11139
6
5.0
6
95
4
51
0
13
0
86
0.58
13420--13446
13
2.1
13
100
0
54
48
0
29
22
1.51
14399--14504
41
2.6
41
83
3
124
35
17
24
21
1.95
15430--15466
18
2.1
18
94
0
65
29
27
21
21
1.99
15957--16054
50
2.0
50
100
0
196
21
16
17
44
1.86
19015--19174
43
3.7
43
77
3
178
29
10
25
34
1.90
19970--20018
21
2.3
22
83
16
68
24
0
6
69
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22693--22735
9
4.8
9
91
0
59
25
11
18
44
1.84
24248--24289
17
2.5
17
92
0
66
40
0
2
57
1.12
24248--24289
6
7.3
6
81
10
52
40
0
2
57
1.12
26129--26727
29
20.8
29
70
17
313
34
31
3
31
1.75
26147--26427
30
9.6
30
74
14
255
33
33
3
28
1.76
26117--26727
59
10.6
58
83
8
669
34
31
3
31
1.75

Tables:   1

The End!