Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012466.1 Kokia drynarioides strain JFW-HI SEQ_127470, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34845

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
323--768
195
2.3
195
84
4
553
28
17
27
27
1.98
5177--5222
22
2.0
22
83
12
56
43
2
2
52
1.25
5449--5475
14
1.9
14
100
0
54
59
0
40
0
0.98
6185--6219
18
1.9
18
88
0
52
48
0
22
28
1.51
6387--6462
40
1.9
40
81
10
93
26
21
22
30
1.99
12852--12878
14
1.9
14
100
0
54
59
0
40
0
0.98
14227--14418
96
2.0
96
93
0
330
25
21
23
30
1.99
25344--25447
37
2.8
37
78
16
101
40
1
4
52
1.33
25340--25447
19
5.8
18
68
20
62
41
1
4
51
1.33
27036--27081
24
1.9
24
86
0
65
23
10
8
56
1.61
28848--28885
18
2.1
19
85
5
51
34
5
0
60
1.19
31009--31156
29
5.2
28
71
12
86
36
22
2
38
1.68
31018--31133
29
4.0
27
72
10
88
37
25
1
35
1.66
31085--31208
29
4.3
28
72
16
83
33
24
4
38
1.74
31115--31309
58
3.3
58
78
6
214
28
25
6
40
1.79
31115--31204
28
3.2
26
71
22
74
32
23
4
40
1.74
33911--34030
40
3.0
39
83
7
134
40
20
23
16
1.91
34044--34209
41
4.1
41
81
3
183
35
21
25
17
1.95

Tables:   1

The End!