Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012473.1 Kokia drynarioides strain JFW-HI SEQ_127477, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34307

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
413--459
6
7.8
6
95
0
85
17
48
17
17
1.81
2888--2950
17
3.6
17
82
2
81
42
1
3
52
1.27
2888--2953
6
11.3
6
71
18
50
43
1
3
51
1.26
4800--5049
30
8.5
29
78
10
249
35
25
2
36
1.69
4800--5066
59
4.5
58
82
6
263
35
25
2
35
1.70
4800--5079
30
9.4
29
78
7
233
35
25
2
36
1.70
5122--5226
28
3.7
28
71
15
81
39
22
3
34
1.73
4800--5167
30
12.5
29
66
19
133
35
26
3
34
1.75
4992--5214
117
1.9
119
81
7
276
35
27
5
30
1.81
4976--5224
117
2.1
118
77
13
262
34
26
5
33
1.79
6246--6328
26
3.2
26
75
10
80
40
32
7
19
1.79
6680--6715
14
2.6
14
100
0
72
55
19
0
25
1.43
8163--8206
18
2.3
20
80
7
56
34
0
2
63
1.07
8160--8206
19
2.4
21
76
16
57
36
0
2
61
1.08
13568--13613
3
15.3
3
95
0
83
65
0
32
2
1.05
16531--16593
26
2.4
26
86
0
90
39
9
23
26
1.86
16780--16860
39
2.1
39
81
6
94
33
2
2
61
1.22
18059--18091
17
1.9
17
100
0
66
12
42
0
45
1.41
24087--24146
28
2.1
28
84
3
75
11
23
11
53
1.70
24302--24373
9
7.8
9
74
22
69
55
0
0
44
0.99
24300--24341
20
2.0
21
90
4
68
50
0
0
50
1.00
24299--24350
21
2.7
20
77
16
65
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24303--24373
27
2.5
29
95
4
128
56
0
0
43
0.99
24326--24374
16
3.4
16
73
26
63
61
0
0
38
0.96
24455--24484
13
2.3
13
94
0
51
0
40
3
56
1.16
24457--24489
7
4.9
7
88
7
50
0
39
3
57
1.14
25311--25373
19
3.4
19
72
25
62
53
0
1
44
1.10
25321--25365
22
2.0
24
91
8
76
53
0
2
44
1.13
31228--31288
21
2.8
22
83
11
65
75
1
9
13
1.12
31254--31283
15
1.9
16
93
6
53
70
0
13
16
1.18
32423--32473
14
3.7
14
76
5
50
23
1
9
64
1.34
32425--32529
28
3.8
28
82
1
113
20
4
15
60
1.53

Tables:   1

The End!