Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012484.1 Kokia drynarioides strain JFW-HI SEQ_127488, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78184

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7280--7340
15
4.1
14
80
14
68
57
3
0
39
1.15
7658--7708
14
3.4
16
80
20
65
52
0
0
47
1.00
7162--7847
378
1.8
369
84
6
904
42
6
9
40
1.65
9342--9384
17
2.7
16
79
10
52
53
4
11
30
1.57
11269--11317
24
2.0
24
92
0
80
40
16
12
30
1.85
11201--11387
94
2.0
94
94
2
331
41
14
11
32
1.82
12823--13100
83
3.3
82
78
11
276
44
12
11
32
1.78
13780--13838
31
1.9
31
85
0
82
55
8
8
27
1.58
14748--14804
30
1.9
30
96
0
105
29
15
21
33
1.94
17164--17215
27
1.9
27
84
0
68
23
17
21
38
1.93
17178--17215
13
2.8
14
88
4
51
23
18
21
36
1.95
17171--17256
20
4.6
20
73
16
67
18
18
23
39
1.92
17164--17235
34
2.1
34
89
0
108
20
18
22
38
1.93
17232--17259
13
2.2
13
100
0
56
14
14
21
50
1.78
18318--18351
3
11.7
3
90
6
52
26
0
2
70
1.01
18327--18353
14
1.9
14
100
0
54
22
0
3
74
0.98
19219--19243
13
1.9
13
100
0
50
40
0
16
44
1.47
33085--33141
20
2.9
20
78
19
66
66
1
1
29
1.12
34178--34248
33
2.2
33
84
0
88
32
1
40
25
1.64
34190--34326
33
4.2
33
76
5
89
28
2
45
24
1.65
34269--34345
33
2.3
33
86
0
100
25
3
50
19
1.64
39542--39605
25
2.6
23
74
13
56
68
1
3
26
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43203--43227
12
2.1
12
100
0
50
52
0
40
8
1.31
44666--44844
88
2.0
88
81
8
204
37
8
8
45
1.66
47501--47668
84
2.0
84
95
0
300
31
23
20
24
1.98
49006--49042
17
2.2
18
90
9
60
54
10
2
32
1.49
59427--59496
21
3.2
21
64
7
59
45
5
17
31
1.71
59432--59519
44
2.0
44
100
0
176
40
6
18
34
1.77
59436--59506
21
3.3
21
65
7
61
45
5
16
32
1.71
65081--65161
43
1.9
42
82
7
101
51
2
1
44
1.22
65131--65204
25
3.1
24
76
14
64
52
0
4
43
1.20
65198--65228
14
2.1
15
94
5
55
77
0
0
22
0.77
65840--65903
31
2.0
32
82
11
78
34
4
1
59
1.28
70304--70379
38
2.0
38
97
0
143
43
34
9
13
1.75
74244--74286
17
2.7
15
76
16
50
51
0
0
48
1.00
74244--74287
16
2.6
17
78
7
54
50
0
0
50
1.00
77203--77274
34
2.1
35
97
2
137
30
9
11
48
1.71
77999--78029
14
2.3
14
94
5
55
25
3
0
70
1.02

Tables:   1

The End!