Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01012502.1 Kokia drynarioides strain JFW-HI SEQ_127506, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 905

Length: 1509
ACGTcount: A:0.28, C:0.18, G:0.13, T:0.38

Warning! 50 characters in sequence are not A, C, G, or T


Found at i:1013 original size:12 final size:12

Alignment explanation


    Indices: 998--1022  Score: 50
    Period size: 12  Copynumber: 2.1  Consensus size: 12

        988 TCTTTATTCC

                        
        998 TTTCTTCCATTT
          1 TTTCTTCCATTT

                        
       1010 TTTCTTCCATTT
          1 TTTCTTCCATTT

             
       1022 T
          1 T

       1023 CTTCACTGCT


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   13  1.00

ACGTcount: A:0.08, C:0.24, G:0.00, T:0.68


Consensus pattern (12 bp):   
TTTCTTCCATTT
Done.