Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012505.1 Kokia drynarioides strain JFW-HI SEQ_127509, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  127659

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
555--811
59
4.3
60
84
7
312
33
27
2
36
1.70
522--811
29
9.8
29
74
13
227
33
26
3
36
1.72
531--906
59
6.4
57
78
9
230
32
26
4
35
1.76
555--858
118
2.6
118
81
7
307
33
26
3
36
1.73
620--955
29
11.5
29
69
15
80
33
26
4
35
1.78
774--906
58
2.3
59
80
1
151
33
25
6
35
1.81
2657--2694
17
2.3
17
95
4
69
34
5
28
31
1.80
3835--3865
4
7.8
4
100
0
62
25
0
22
51
1.48
8206--8273
31
2.2
32
84
5
86
39
8
17
33
1.81
17555--17602
19
2.5
19
100
0
96
35
6
29
29
1.82
17555--17612
19
3.1
19
89
0
62
39
5
27
27
1.78
32204--32240
14
2.6
15
87
8
51
37
0
0
62
0.96
33379--33432
17
3.1
17
76
5
54
31
3
3
61
1.31
35273--35310
9
4.2
9
86
10
51
47
13
10
28
1.76
43792--43862
36
2.0
35
81
10
81
63
5
1
29
1.26
48425--48487
20
3.0
21
84
6
67
55
3
1
39
1.25
49282--49331
25
2.0
24
88
3
73
40
16
14
30
1.87
54644--54684
21
2.0
21
85
0
55
43
2
0
53
1.13
56581--56614
18
1.9
17
88
5
50
70
2
0
26
1.01
62681--62826
73
2.0
73
98
0
283
52
23
9
14
1.71
64067--64110
18
2.5
17
85
7
52
27
4
0
68
1.09
72174--72261
41
2.1
41
95
0
158
22
13
9
54
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72307--72348
12
3.4
12
81
15
50
35
2
0
61
1.09
91369--91423
24
2.3
24
87
0
74
25
12
10
50
1.73
94097--94121
8
3.1
8
100
0
50
24
24
0
52
1.48
98686--98718
2
16.5
2
100
0
66
48
0
0
51
1.00
104576--104602
6
4.5
6
100
0
54
0
51
0
48
1.00
106128--106189
31
2.0
31
87
0
88
35
4
11
48
1.60
106801--106867
22
3.2
20
72
17
55
64
4
0
31
1.14
106815--106868
21
2.5
21
76
8
56
64
5
0
29
1.16
113924--113974
12
4.5
11
75
15
50
47
1
1
49
1.24
119989--120023
15
2.2
16
90
5
54
34
11
17
37
1.85
127133--127169
18
2.1
18
94
0
65
18
10
10
59
1.59

Tables:   1

The End!