Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012511.1 Kokia drynarioides strain JFW-HI SEQ_127516, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50105

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2999--3073
17
4.3
17
81
8
89
40
1
4
54
1.27
4809--5056
29
8.4
30
81
10
271
34
31
3
31
1.74
4809--5034
59
3.8
58
84
9
273
33
31
3
31
1.73
5360--5544
96
1.9
96
83
2
237
29
19
15
35
1.93
7089--7277
97
1.9
98
81
5
231
34
13
12
39
1.82
9016--9073
29
2.0
29
100
0
116
51
17
3
27
1.61
16606--16665
29
2.1
30
87
6
88
20
36
0
43
1.52
19294--19371
31
2.5
31
95
0
138
17
8
17
55
1.68
19291--19391
31
3.3
31
88
1
132
19
9
19
50
1.75
21165--21191
14
1.9
14
100
0
54
70
0
14
14
1.17
22238--22268
10
3.1
10
100
0
62
9
29
9
51
1.66
28618--28644
14
1.9
14
100
0
54
70
0
14
14
1.17
33505--33549
18
2.5
18
96
0
81
44
2
42
11
1.52
38023--38078
28
2.0
28
92
0
94
53
7
5
33
1.51
42149--42471
175
1.8
175
91
1
540
38
16
19
24
1.92
44653--44677
2
12.5
2
100
0
50
48
0
0
52
1.00
47047--47137
40
2.3
39
77
9
94
30
8
15
45
1.77
47078--47137
20
3.0
20
82
0
75
28
8
16
46
1.76
49128--49167
20
2.0
20
100
0
80
50
0
0
50
1.00
49592--49618
14
1.9
14
100
0
54
29
29
11
29
1.91
49889--49984
17
5.6
17
74
7
77
52
6
5
36
1.49

Tables:   1

The End!