Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012514.1 Kokia drynarioides strain JFW-HI SEQ_127519, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29607

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12042--12077
18
2.0
18
100
0
72
44
0
0
55
0.99
11992--12140
52
2.8
53
79
10
162
45
1
1
51
1.18
13994--14038
23
2.0
23
81
0
54
24
6
4
64
1.37
17857--18095
125
1.9
120
84
5
307
29
18
15
36
1.92
19340--19391
27
1.9
27
88
7
79
48
9
9
32
1.69
20185--20273
15
5.8
15
72
13
65
60
1
0
38
1.04
20185--20258
31
2.5
29
79
12
78
59
1
0
39
1.06
20190--20296
47
2.3
46
80
16
114
62
1
0
35
1.06
21612--21678
33
2.0
33
97
0
125
28
10
26
34
1.90
25254--25384
66
2.0
66
100
0
262
41
12
21
24
1.87
26679--26744
10
6.2
11
71
18
50
45
3
1
50
1.26
26665--26730
31
2.1
33
88
5
100
37
4
1
56
1.29
26889--26913
13
1.9
13
100
0
50
72
0
0
28
0.86
27163--27237
38
1.9
39
84
7
100
41
8
10
40
1.69
27878--27908
9
3.4
9
90
0
53
29
0
9
61
1.28
28517--28571
27
2.0
27
86
6
76
32
21
32
12
1.91

Tables:   1

The End!