Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012523.1 Kokia drynarioides strain JFW-HI SEQ_127530, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94342

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1137--1180
22
2.0
22
95
0
79
38
4
22
34
1.75
3200--3253
20
2.7
20
91
0
81
27
9
35
27
1.87
5774--5900
23
5.5
23
85
6
134
11
26
22
39
1.88
9234--9268
17
2.1
16
89
5
52
71
5
0
22
1.07
16061--16092
16
2.0
16
100
0
64
50
0
12
37
1.41
17604--17645
22
2.0
20
86
13
59
45
4
2
47
1.36
18053--18120
29
2.4
27
76
14
66
55
5
1
36
1.33
29077--29110
14
2.5
13
86
9
50
14
5
0
79
0.91
29275--29315
21
2.0
21
90
0
64
24
0
12
63
1.28
30422--30484
31
2.0
31
100
0
126
50
3
12
33
1.56
33932--33964
15
2.1
16
88
5
50
36
0
0
63
0.95
58544--58603
28
2.1
28
84
6
77
40
3
5
51
1.40
59125--59173
19
2.7
18
81
15
57
65
0
2
32
1.04
66034--66370
62
5.5
61
82
5
391
38
15
16
29
1.90
66028--66393
124
3.0
123
85
5
458
38
15
17
28
1.90
66947--66996
16
3.0
17
72
22
52
38
0
0
62
0.96
67775--67888
57
2.0
57
98
0
219
35
28
7
28
1.83
68134--68159
13
2.0
13
100
0
52
38
30
15
15
1.88
71964--72016
21
2.5
21
96
0
97
37
24
13
24
1.91
72717--72762
24
1.9
24
86
0
65
28
30
21
19
1.98
72744--72820
27
2.8
27
80
2
91
36
24
15
23
1.94
74349--74457
54
2.0
53
96
1
200
31
22
10
35
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77188--77250
31
2.1
31
82
5
76
44
14
9
31
1.77
77318--77357
21
1.9
21
85
10
55
22
5
15
57
1.57
78780--78820
22
1.9
22
85
5
57
63
9
2
24
1.37
86019--86192
86
2.0
86
98
0
339
40
13
11
34
1.80
88757--88841
31
2.7
30
71
16
75
34
8
10
47
1.68
89892--89934
19
2.3
19
83
0
50
58
4
9
27
1.49
91892--91932
21
2.0
21
85
0
55
31
12
12
43
1.79

Tables:   1

The End!