Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012527.1 Kokia drynarioides strain JFW-HI SEQ_127534, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  106758

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1861--2051
23
8.4
22
87
4
135
40
23
24
11
1.87
1833--2051
46
4.7
45
82
8
223
41
22
25
11
1.87
1833--2051
69
3.1
68
81
11
241
41
22
25
11
1.87
4152--4176
3
8.3
3
100
0
50
68
0
32
0
0.90
5796--5902
49
2.3
46
83
4
142
40
12
14
33
1.82
6387--6468
22
3.8
22
77
9
80
8
9
17
64
1.47
6459--6565
21
5.0
21
81
12
119
6
4
20
68
1.31
6518--6588
12
6.2
12
74
9
60
8
2
18
70
1.25
6459--6588
44
3.0
43
85
6
149
7
3
20
67
1.32
6507--6589
11
7.5
11
74
17
64
7
2
21
68
1.25
12768--12814
24
1.9
24
86
4
67
25
19
8
46
1.77
13229--13261
16
2.1
16
88
11
50
54
0
0
45
0.99
13230--13268
12
3.1
12
82
10
51
61
0
0
38
0.96
17667--17711
22
2.0
22
91
0
72
28
44
6
20
1.76
23538--23586
24
2.0
24
84
7
64
44
20
12
22
1.84
27810--27895
17
4.8
17
77
11
84
40
2
5
51
1.39
27811--27893
6
13.8
6
71
12
55
42
2
4
50
1.36
29630--29805
30
5.9
30
81
5
178
33
32
3
30
1.74
29642--29805
60
2.7
59
82
5
197
35
31
3
29
1.73
29611--29804
29
6.5
30
78
8
164
35
31
3
29
1.75
29611--29803
89
2.2
88
86
4
262
35
31
3
30
1.75
31933--31976
15
2.8
16
83
13
56
54
4
0
40
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32108--32146
20
2.0
20
89
0
60
51
0
2
46
1.14
42306--42333
2
14.0
2
100
0
56
50
0
0
50
1.00
44352--44510
30
5.3
29
75
10
124
32
4
23
39
1.75
44790--44845
26
2.1
27
83
3
69
41
25
3
30
1.72
45479--45526
23
2.1
23
100
0
96
4
22
56
16
1.58
46333--46617
40
7.3
38
75
10
181
25
15
24
33
1.95
46333--46619
39
7.4
40
76
12
233
26
15
24
33
1.95
46674--46800
50
2.5
50
82
5
159
20
25
18
36
1.95
58430--58480
2
25.5
2
100
0
102
49
0
0
50
1.00
58752--58780
3
9.7
3
100
0
58
0
31
0
68
0.89
60881--60914
17
2.0
17
88
0
50
38
8
0
52
1.33
73876--73932
18
3.1
17
77
22
62
54
0
42
3
1.17
73880--73929
14
3.6
14
74
15
50
56
0
40
4
1.18
75706--75733
14
2.0
14
100
0
56
50
21
7
21
1.72
78944--78988
21
2.1
22
87
4
65
26
0
4
68
1.08
78953--79004
21
2.4
21
83
3
59
30
1
1
65
1.14
78991--79043
18
3.1
18
76
12
58
41
0
0
58
0.98
92273--92327
6
9.2
6
97
0
92
0
12
67
20
1.23
94908--94960
29
1.9
29
88
11
85
37
1
1
58
1.20
101526--101587
30
2.2
29
82
8
74
37
6
6
50
1.54
104047--104086
18
2.3
18
86
4
55
52
17
17
12
1.74
104724--104796
36
2.1
36
87
5
105
35
0
1
63
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106677--106727
23
2.2
24
82
10
61
27
25
0
47
1.53

Tables:   1

The End!