Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012531.1 Kokia drynarioides strain JFW-HI SEQ_127538, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  164516

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
578--611
17
2.0
17
100
0
68
29
11
41
17
1.85
21418--21454
6
6.2
6
100
0
74
16
48
0
35
1.46
44313--44338
5
5.2
5
100
0
52
38
19
19
23
1.93
44665--44702
18
2.1
18
90
9
60
23
10
15
50
1.75
66346--66382
14
2.4
16
86
8
51
45
0
8
45
1.32
68121--68156
4
9.0
4
100
0
72
25
50
0
25
1.50
69078--69117
15
2.8
15
88
7
57
27
0
0
72
0.85
81921--81964
22
2.0
22
82
8
54
29
0
2
68
1.02
82480--82513
17
2.0
17
94
0
59
61
17
0
20
1.34
83115--83193
6
13.7
6
75
12
76
44
1
2
51
1.23
83115--83193
17
4.6
17
80
1
95
44
1
2
51
1.23
83115--83193
34
2.3
35
86
2
106
44
1
2
51
1.23
83115--83193
11
6.9
11
72
17
63
44
1
2
51
1.23
83839--83916
3
25.7
3
70
7
50
52
1
6
39
1.35
83838--83916
9
8.7
9
72
8
61
51
1
6
40
1.35
86048--86680
201
3.2
200
87
2
867
34
18
23
23
1.96
86564--86902
158
2.1
158
89
1
509
36
20
20
22
1.95
86722--87509
201
3.9
201
85
2
979
35
18
22
23
1.96
86085--87809
765
2.3
766
93
1
2933
35
18
22
23
1.96
87329--87667
158
2.1
158
87
1
491
35
19
20
23
1.95
87487--87873
206
1.9
206
90
0
612
35
19
22
23
1.96
87128--87928
364
2.2
359
90
2
1219
35
19
22
23
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88442--88537
6
16.7
6
73
12
85
44
1
2
52
1.19
88442--88537
17
5.6
17
82
1
120
44
1
2
52
1.19
100633--100662
4
7.5
4
92
0
51
0
73
0
26
0.84
103146--103214
33
2.1
33
89
10
106
31
10
36
21
1.87
103796--103913
58
2.0
58
100
0
236
44
23
11
20
1.85
122390--122574
92
2.0
91
98
1
361
49
10
3
35
1.54
139000--139034
2
17.5
2
100
0
70
51
48
0
0
1.00
146641--146679
2
19.5
2
94
0
69
51
0
46
2
1.14
158436--158486
24
2.2
23
86
10
68
45
3
0
50
1.20
159285--159343
30
2.0
30
83
6
75
55
3
11
28
1.52

Tables:   1

The End!