Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012535.1 Kokia drynarioides strain JFW-HI SEQ_127543, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  115541

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8175--8214
19
2.0
20
90
4
64
72
0
0
27
0.85
29154--29220
18
3.3
22
64
20
63
28
14
8
47
1.75
29155--29231
39
2.0
39
100
0
154
29
15
10
44
1.80
32883--32913
4
7.8
4
92
0
53
3
74
0
22
0.96
38044--38081
17
2.2
19
86
13
55
21
10
0
68
1.19
40102--40130
13
2.1
14
93
6
51
34
3
6
55
1.44
41326--41609
29
9.7
28
75
15
211
27
4
32
35
1.78
41315--41542
59
3.9
59
84
7
261
29
3
31
35
1.76
41315--41583
59
4.6
58
81
9
257
29
4
31
34
1.76
43373--43411
5
7.4
5
83
11
51
61
0
0
38
0.96
43363--43411
11
4.5
11
87
5
64
55
0
0
44
0.99
43382--43413
16
2.0
16
93
0
55
65
0
0
34
0.93
44747--44800
21
2.6
21
75
0
54
37
7
9
46
1.64
54757--54799
19
2.3
19
87
0
59
67
4
2
25
1.22
54769--54865
28
3.4
27
78
10
88
67
1
4
27
1.16
54769--54866
10
10.6
9
70
21
51
66
1
4
28
1.17
54738--54867
38
3.4
38
77
15
117
63
1
3
31
1.22
61772--61813
21
2.0
21
90
4
68
16
0
2
80
0.81
61831--61878
23
2.1
23
84
0
60
10
22
14
52
1.72
61909--61959
25
2.0
25
88
0
75
19
15
17
47
1.83
63354--63402
15
3.3
14
83
11
62
36
0
14
48
1.44
74927--74951
11
2.3
11
100
0
50
0
8
0
92
0.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74925--74953
14
2.0
15
93
6
51
0
10
0
89
0.48
81546--81656
58
1.9
58
90
3
179
35
0
16
48
1.46
84230--84299
33
2.2
33
81
2
79
34
1
10
54
1.43
84387--84424
16
2.6
14
88
12
51
50
2
0
47
1.15
84666--84713
24
2.0
24
83
4
60
72
0
2
25
0.95
84965--85072
48
2.3
48
96
1
200
58
4
2
34
1.33
84979--85062
26
3.4
25
67
18
68
55
3
3
36
1.34
93857--93903
22
2.1
22
84
7
60
27
10
8
53
1.64
94264--94358
30
3.1
31
83
11
108
53
2
2
42
1.24
94257--94364
31
3.6
30
79
10
107
52
1
2
42
1.26
101815--101845
5
6.2
5
96
0
53
61
0
35
3
1.12
105586--105629
18
2.5
17
76
20
54
75
6
2
15
1.12

Tables:   1

The End!