Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012539.1 Kokia drynarioides strain JFW-HI SEQ_127548, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  101769

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12846--12913
17
3.9
17
81
7
66
22
16
11
50
1.77
12849--12914
34
1.9
34
85
11
91
21
16
12
50
1.77
16961--17017
24
2.4
23
80
8
60
75
5
0
19
0.99
16979--17013
17
2.0
18
88
5
54
80
2
0
17
0.84
25364--25413
20
2.5
20
100
0
100
16
16
28
40
1.89
29031--29088
17
3.4
17
75
0
53
20
17
13
48
1.81
29023--29088
34
1.9
34
82
11
82
21
18
13
46
1.83
42365--42458
45
2.1
44
88
5
136
28
18
30
22
1.97
57657--57686
15
2.0
15
93
0
51
70
0
30
0
0.88
59753--59780
14
2.0
14
100
0
56
14
14
35
35
1.86
62881--63100
109
2.0
109
92
0
368
29
24
15
30
1.96
64275--64313
17
2.3
17
90
0
60
46
25
12
15
1.81
71513--71610
45
2.2
44
88
1
142
25
22
28
23
1.99
73726--73939
41
5.1
41
83
6
227
25
26
10
37
1.89
74737--74784
22
2.2
21
81
3
60
37
14
0
47
1.44
77430--77799
195
1.9
190
82
3
454
27
25
17
28
1.98
83722--83751
15
1.9
16
93
6
53
36
16
0
46
1.47
86513--86951
195
2.3
194
81
4
481
25
26
18
28
1.98
91435--91542
45
2.4
45
86
7
141
29
22
26
21
1.99
93219--93251
11
3.0
11
90
0
57
21
15
0
63
1.30
96313--96372
22
2.8
22
87
7
70
18
6
1
73
1.14
96326--96372
21
2.2
22
92
3
78
19
4
2
74
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
99112--99167
18
3.1
18
71
21
53
16
3
0
80
0.85
99112--99165
4
13.5
4
76
21
51
16
3
0
79
0.87
99525--99587
32
2.0
32
100
0
126
20
15
12
50
1.77
100830--100872
22
2.0
22
86
9
61
20
6
0
72
1.08

Tables:   1

The End!