Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012559.1 Kokia drynarioides strain JFW-HI SEQ_127568, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64511

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--777
45
17.2
45
81
2
851
32
8
16
41
1.80
516--628
24
4.9
23
65
19
65
32
8
18
39
1.82
758--799
17
2.5
17
92
0
66
28
4
14
52
1.62
713--831
62
1.9
62
89
0
184
32
7
16
42
1.77
2786--2942
56
2.8
55
80
7
163
33
20
19
27
1.96
4429--4490
25
2.6
23
80
10
70
30
3
1
64
1.19
5544--5600
30
1.9
30
92
7
98
19
22
17
40
1.91
5705--6017
30
10.5
30
81
7
298
40
21
3
34
1.70
17388--17529
50
2.8
50
82
2
178
33
20
24
21
1.97
17593--17748
84
1.9
84
85
5
217
30
21
19
28
1.98
17634--17762
40
3.2
40
76
9
118
28
24
18
28
1.98
17907--18062
51
3.1
51
66
17
126
34
19
20
25
1.96
18704--19084
30
12.9
29
77
11
312
39
20
4
35
1.73
18707--19084
59
6.4
60
79
9
361
39
20
4
35
1.74
18707--19084
60
6.4
59
80
8
346
39
20
4
35
1.74
20283--20322
3
13.3
3
100
0
80
32
0
0
67
0.91
23410--23454
20
2.3
19
81
7
63
46
2
2
48
1.26
27900--27990
22
4.3
21
73
12
69
6
8
21
62
1.47
27900--28002
22
4.8
22
71
18
65
5
8
22
63
1.45
27907--27989
43
2.0
42
86
11
116
7
9
21
61
1.51
27966--28035
33
2.2
32
82
7
79
7
10
20
62
1.49
28027--28095
12
5.8
12
77
6
50
8
1
14
75
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28010--28102
24
3.8
23
80
9
87
8
3
15
73
1.21
27999--28102
48
2.2
46
82
3
118
8
3
16
71
1.26
28041--28102
12
5.2
12
78
7
63
8
1
17
72
1.17
28076--28115
20
2.0
21
90
5
64
7
0
27
65
1.20
28729--28780
18
3.0
18
83
10
56
44
0
0
55
0.99
31175--31234
31
1.9
31
93
0
102
38
11
15
35
1.83
36086--36133
24
2.0
24
100
0
96
45
8
16
29
1.76
40089--40115
13
2.1
13
100
0
54
55
7
0
37
1.28
41585--41636
25
2.1
25
85
0
68
65
3
0
30
1.10
41881--41943
30
2.1
30
96
0
117
30
3
15
50
1.60
54640--54828
29
6.3
29
80
4
189
33
2
29
34
1.70
54640--54816
59
3.0
59
84
0
228
33
1
29
35
1.68
56704--56788
6
15.0
6
71
22
60
52
2
0
44
1.13
56710--56788
17
4.7
17
80
14
92
53
2
0
44
1.14
56697--56788
23
3.8
23
73
23
82
53
2
0
44
1.12
56710--56788
33
2.4
34
85
12
110
53
2
0
44
1.14
57294--57343
25
2.0
25
96
0
91
38
24
10
28
1.87
58230--58289
31
1.9
31
82
0
75
51
13
3
31
1.57
63444--63500
21
2.8
20
73
7
60
54
10
0
35
1.35
63508--63550
22
2.0
21
81
4
50
34
2
4
58
1.32

Tables:   1

The End!