Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012577.1 Kokia drynarioides strain JFW-HI SEQ_127586, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33692

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3416--3465
16
3.2
16
73
21
52
34
0
6
60
1.21
3726--3768
21
2.1
21
86
4
61
58
13
2
25
1.48
4104--4152
25
2.0
25
88
8
73
0
40
0
59
0.98
4150--4188
4
9.8
4
83
10
53
0
23
0
76
0.78
4130--4179
18
2.8
18
82
11
50
0
30
0
70
0.88
4148--4192
21
2.2
20
84
7
65
0
26
0
73
0.84
4297--4439
69
2.1
65
88
5
205
40
32
13
12
1.83
5943--5972
3
10.0
3
100
0
60
0
33
0
66
0.92
11008--11041
17
2.0
17
88
11
52
61
11
2
23
1.43
11338--11378
2
20.5
2
100
0
82
51
0
0
48
1.00
13741--13821
26
3.0
28
73
24
84
58
2
2
37
1.25
13750--13815
24
2.7
25
77
13
66
59
3
3
34
1.28
13901--13940
6
6.8
6
97
2
73
0
67
0
32
0.91
19273--19335
32
2.0
31
87
3
90
36
9
12
41
1.76
23054--23082
7
4.1
7
100
0
58
0
13
27
58
1.36
27540--27578
20
2.1
17
86
13
51
69
2
5
23
1.21
32082--32148
23
2.9
23
86
4
91
10
19
20
49
1.77
32099--32194
23
4.2
22
79
10
86
11
20
25
42
1.85
32151--32202
23
2.3
23
90
3
79
15
23
25
36
1.93
33102--33158
12
4.9
12
77
12
57
42
17
15
24
1.88
33099--33158
23
2.6
23
81
7
77
41
18
15
25
1.89
33103--33158
11
4.9
11
76
12
51
41
17
16
25
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33170--33232
22
2.9
22
97
0
117
31
19
20
28
1.97

Tables:   1

The End!