Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012582.1 Kokia drynarioides strain JFW-HI SEQ_127591, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70427

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
345--408
28
2.2
29
83
5
76
26
10
29
32
1.90
401--514
59
1.9
59
83
0
147
34
3
28
33
1.75
417--559
28
4.9
29
82
3
137
31
2
32
33
1.70
2394--2505
17
6.4
18
77
12
83
51
1
1
44
1.22
2413--2505
35
2.7
34
81
8
107
53
2
1
43
1.19
2415--2472
11
5.1
11
79
10
55
55
1
1
41
1.20
2396--2505
52
2.1
52
81
6
125
51
1
1
44
1.22
7147--7185
6
6.5
6
100
0
78
33
17
15
33
1.92
16952--16978
2
13.5
2
100
0
54
48
0
0
51
1.00
23241--23287
13
3.5
13
77
11
58
70
10
0
19
1.16
23243--23286
15
3.1
15
74
12
56
68
11
0
20
1.20
26549--26606
28
2.1
28
83
6
73
32
1
15
50
1.55
26598--26647
26
1.9
26
83
0
64
28
0
12
60
1.32
26713--26753
6
6.8
6
83
10
57
65
14
2
17
1.37
29674--29707
17
2.0
17
100
0
68
52
0
0
47
1.00
30635--30674
18
2.4
17
87
8
55
35
20
2
42
1.65
31471--31525
21
2.6
21
71
8
58
63
7
5
23
1.41
31505--31587
12
7.0
12
79
2
60
69
16
4
8
1.31
31528--31579
6
8.7
6
73
0
50
75
19
1
3
1.06
31530--31576
15
3.1
15
76
11
51
72
21
2
4
1.12
31528--31584
24
2.4
24
87
0
87
73
19
1
5
1.11
31612--31709
22
4.9
21
72
18
75
65
20
7
7
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31637--31718
42
1.9
43
85
7
114
64
20
6
8
1.43
33129--33175
2
23.5
2
100
0
94
51
0
0
48
1.00
42875--42922
24
1.9
25
83
8
62
16
10
6
66
1.41
55576--55649
36
2.1
36
92
0
121
22
25
16
35
1.95
55647--55676
3
10.3
3
92
7
53
0
30
0
70
0.88
57159--57199
21
2.0
21
90
0
64
48
7
9
34
1.64
60955--61013
29
2.1
28
87
3
82
54
6
3
35
1.44
62221--62253
3
11.0
3
100
0
66
66
0
0
33
0.92
62730--62764
18
1.9
18
88
11
54
34
2
0
62
1.10
66454--66490
19
1.9
20
88
5
58
37
8
0
54
1.30
69997--70081
31
2.8
30
76
3
89
36
0
8
55
1.30
70126--70229
9
10.3
10
68
20
56
52
0
3
43
1.19
70285--70328
18
2.4
19
81
14
56
54
2
0
43
1.12

Tables:   1

The End!