Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012586.1 Kokia drynarioides strain JFW-HI SEQ_127595, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  234085

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11961--11996
17
2.1
17
89
0
54
22
2
2
72
1.11
12704--12730
6
4.5
6
100
0
54
18
29
18
33
1.95
13981--14018
19
1.9
19
89
5
58
39
5
0
55
1.23
17548--17578
12
2.7
11
90
9
53
12
6
6
74
1.21
25105--25153
23
2.3
21
79
10
55
32
2
2
63
1.17
33449--33478
6
5.0
6
100
0
60
33
33
0
33
1.58
37719--37924
111
1.8
112
93
1
360
33
8
19
38
1.81
39154--39214
18
3.4
17
80
13
59
27
3
0
68
1.05
46488--46563
30
2.6
29
85
6
98
56
9
0
34
1.31
52110--52470
45
8.0
45
89
2
467
24
26
22
26
2.00
55456--55727
136
2.0
136
96
0
499
28
15
16
38
1.90
62332--62360
14
2.1
14
100
0
58
41
6
20
31
1.79
64932--64960
3
9.7
3
100
0
58
65
0
0
34
0.93
66527--66557
3
10.3
3
100
0
62
67
0
0
32
0.91
67715--67739
2
12.5
2
100
0
50
52
0
0
48
1.00
68597--68709
55
2.1
55
83
3
138
35
16
16
30
1.92
69399--69471
26
2.8
26
97
2
137
39
20
24
15
1.91
69453--69531
23
3.5
22
82
3
95
37
26
21
13
1.91
74729--74850
23
5.4
22
82
8
129
13
22
23
40
1.90
75527--75908
58
6.5
56
73
11
245
41
15
16
26
1.88
75856--75978
57
2.2
54
85
4
156
34
18
13
32
1.90
77112--77137
11
2.4
11
100
0
52
73
0
0
26
0.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105782--105809
2
14.0
2
100
0
56
50
0
50
0
1.00
108091--108506
206
2.0
206
97
0
778
25
20
20
32
1.97
121643--121745
50
2.1
50
96
0
188
42
7
12
36
1.72
129889--130014
23
5.5
23
76
8
114
45
19
22
12
1.84
129889--129980
46
2.0
44
93
4
157
46
20
19
13
1.83
135316--135349
18
1.9
17
94
5
59
41
0
2
55
1.15
142694--142726
16
2.1
16
100
0
66
57
18
6
18
1.60
146474--146502
5
5.8
5
100
0
58
58
41
0
0
0.98
175512--175544
16
1.9
18
88
11
52
63
12
6
18
1.48
192562--192652
38
2.4
38
90
3
139
30
14
8
46
1.75
192929--193017
42
2.1
42
91
0
142
32
24
25
16
1.96
194589--194630
6
7.0
6
100
0
84
0
66
16
16
1.25
195106--195134
2
14.5
2
100
0
58
48
0
0
51
1.00
196187--196616
223
1.9
222
85
6
586
50
9
6
33
1.60
197204--197318
60
1.9
60
87
0
167
29
4
11
54
1.55
208940--208969
4
7.5
4
100
0
60
23
0
0
76
0.78
223309--223351
19
2.2
20
84
12
54
67
13
2
16
1.33
228547--228581
17
2.0
18
88
5
54
31
0
2
65
1.07
232647--232697
23
2.2
23
89
0
75
43
25
25
5
1.77
233986--234023
16
2.4
16
100
0
76
55
0
21
23
1.44

Tables:   1

The End!