Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012588.1 Kokia drynarioides strain JFW-HI SEQ_127597, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  169585

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9345--9508
82
2.0
82
98
0
319
29
9
21
38
1.86
31970--32017
18
2.8
16
78
6
51
14
16
8
60
1.57
32593--32634
6
6.8
6
79
15
50
78
0
19
2
0.86
32593--32637
12
3.8
12
82
8
56
77
0
20
2
0.87
36738--36775
19
2.0
20
84
5
51
63
10
10
15
1.52
36844--36880
15
2.4
16
86
13
51
67
2
21
8
1.29
39161--39421
23
11.3
23
86
0
342
36
4
13
45
1.63
39160--39421
69
3.8
69
92
0
380
36
4
12
45
1.63
41728--41779
21
2.5
22
78
12
56
71
1
3
23
1.13
42812--42851
18
2.3
18
86
4
55
12
5
2
80
0.98
44368--44431
24
2.6
25
92
2
103
21
20
25
32
1.97
44397--44471
26
2.9
26
80
2
89
26
17
21
34
1.95
53011--53077
35
2.0
33
85
11
91
34
5
13
46
1.68
58058--58139
31
2.7
29
83
10
101
32
3
13
50
1.59
62582--62627
20
2.4
19
81
3
56
56
0
6
36
1.25
74416--74455
15
2.7
15
88
0
62
62
2
35
0
1.09
86715--86746
15
2.1
16
94
5
57
0
25
0
75
0.81
99405--99449
22
2.1
21
88
8
65
64
4
0
31
1.13
111428--111893
231
2.0
234
91
1
758
26
21
16
35
1.94
125194--125252
30
2.0
30
89
0
91
18
15
22
44
1.87
127917--127955
20
2.0
20
84
0
51
35
5
12
46
1.65
133312--133353
21
2.0
21
85
0
57
35
11
11
40
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
135327--135413
20
4.3
20
72
10
61
33
8
13
44
1.73
135378--135424
20
2.2
20
85
7
58
36
6
6
51
1.53
136608--137075
234
2.0
234
97
0
891
35
7
19
36
1.81
138334--138792
232
2.0
232
96
0
855
35
11
18
35
1.86
153574--153626
4
13.2
4
76
7
54
77
5
15
1
1.04
153585--153615
8
3.9
8
100
0
62
77
9
12
0
0.99
154534--154584
21
2.6
19
81
9
59
33
1
11
52
1.49
154976--155074
50
2.0
51
83
2
128
28
18
17
36
1.93
162653--162712
6
10.3
6
83
7
79
18
3
0
78
0.89
162653--162713
17
3.5
17
84
10
79
19
3
0
77
0.91
162653--162712
11
5.2
11
90
8
84
18
3
0
78
0.89
162964--163050
43
2.0
43
100
0
174
27
6
27
37
1.82
163689--163742
11
4.5
12
76
15
58
79
1
11
7
1.00
168004--168063
6
10.3
6
83
7
79
18
3
0
78
0.89
168004--168064
17
3.5
17
84
10
79
19
3
0
77
0.91
168004--168063
11
5.2
11
90
8
84
18
3
0
78
0.89
168315--168401
43
2.0
43
100
0
174
27
6
27
37
1.82
169040--169093
11
4.5
12
76
15
58
79
1
11
7
1.00

Tables:   1

The End!