Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012602.1 Kokia drynarioides strain JFW-HI SEQ_127611, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  107664

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6508--6550
22
1.9
23
85
4
61
39
9
9
41
1.69
8376--8406
2
15.5
2
100
0
62
51
0
0
48
1.00
15066--15095
9
3.2
9
90
9
51
43
3
10
43
1.54
22019--22054
19
1.9
18
88
5
54
33
0
27
38
1.57
23958--24015
30
1.9
31
86
10
84
60
1
1
36
1.17
24368--24413
21
2.2
21
84
0
56
28
2
4
65
1.23
24371--24457
29
3.2
26
80
11
86
31
2
2
64
1.18
24392--24476
18
4.7
18
74
8
73
34
3
1
61
1.21
24364--24505
10
14.7
10
68
15
59
33
2
2
62
1.19
26635--26660
13
2.0
13
100
0
52
53
0
0
46
1.00
28784--28846
32
2.0
32
90
3
101
38
9
7
44
1.66
29026--29151
62
2.0
62
87
0
180
45
12
23
18
1.84
42551--42587
18
2.1
18
100
0
74
40
16
32
10
1.83
42861--42901
15
2.8
15
75
17
50
26
2
2
68
1.15
59176--59210
18
1.9
18
88
0
52
57
14
2
25
1.51
61313--61337
4
6.2
4
100
0
50
0
24
0
76
0.80
62765--62802
14
2.8
14
81
18
53
36
0
2
60
1.11
62769--62811
14
3.3
12
79
17
50
41
0
2
55
1.12
66105--66456
93
3.8
93
82
2
420
21
16
39
22
1.92
66078--66502
186
2.3
186
87
1
629
21
16
39
22
1.92
66097--66502
93
4.4
91
78
7
386
21
16
39
22
1.92
76460--76495
16
2.2
16
90
0
54
75
5
2
16
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
78024--78076
24
2.2
25
89
3
81
16
1
16
64
1.39
78167--78276
31
3.5
31
65
16
82
38
6
9
46
1.61
79125--79166
20
2.0
21
86
4
59
23
4
2
69
1.20
92692--92743
15
3.6
14
79
7
59
28
1
0
69
0.99
105913--105944
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!