Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012628.1 Kokia drynarioides strain JFW-HI SEQ_127637, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  183682

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2128--2184
4
13.8
4
81
7
69
0
31
0
68
0.90
2128--2185
21
2.5
22
83
13
73
0
32
0
67
0.91
3085--3111
1
27.0
1
100
0
54
0
0
0
100
0.00
8144--8170
4
6.8
4
100
0
54
51
0
0
48
1.00
19493--19528
17
2.2
17
95
5
65
13
11
5
69
1.34
25785--25814
9
3.3
9
90
0
51
40
0
3
56
1.16
33367--33425
29
2.0
30
90
3
93
28
1
15
54
1.51
34286--34337
23
2.3
23
80
6
61
63
1
0
34
1.06
37900--38309
225
1.8
225
81
4
513
36
7
17
39
1.77
39587--39634
25
1.9
26
83
8
64
25
6
22
45
1.75
44618--44670
26
2.0
26
96
0
97
37
3
26
32
1.74
50103--50141
20
2.0
20
89
0
60
51
0
0
48
1.00
50396--50453
26
2.1
27
84
6
73
51
5
3
39
1.41
51450--51537
44
2.0
44
82
6
106
50
1
21
27
1.56
58870--58929
24
2.5
24
83
2
75
50
6
5
38
1.51
60053--60098
23
2.0
23
83
4
58
17
4
8
69
1.31
62970--63035
24
2.7
23
77
9
60
69
3
21
6
1.24
64664--64710
15
3.1
15
82
8
60
55
0
12
31
1.38
64870--64898
13
2.1
14
93
6
51
44
3
0
51
1.18
72689--72723
16
2.2
16
89
0
52
37
28
5
28
1.80
75079--75275
95
2.0
97
80
10
217
29
9
14
47
1.75
75932--75983
24
2.1
25
82
3
61
61
7
7
23
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90636--90720
21
4.4
20
71
17
65
23
8
17
50
1.73
90619--91003
55
6.9
55
83
5
477
24
8
16
50
1.71
90626--90947
171
1.9
171
87
2
477
24
8
16
50
1.73
91187--91234
24
2.0
24
100
0
96
45
8
0
45
1.33
96427--96818
197
2.0
194
83
10
497
44
14
6
34
1.72
104281--104328
21
2.3
22
82
7
55
60
4
4
31
1.35
110590--110637
22
2.2
21
85
10
62
66
2
6
25
1.26
110590--110645
22
2.5
22
80
8
60
62
1
7
28
1.32
120878--120904
3
9.0
3
100
0
54
33
0
0
66
0.92
128128--128188
22
2.6
24
76
5
63
42
3
3
50
1.34
161653--161688
3
12.0
3
100
0
72
33
0
0
66
0.92
163246--163378
65
2.0
65
97
0
248
33
7
16
42
1.76
167489--167531
16
2.8
15
72
6
50
46
2
0
51
1.13
168771--168813
18
2.4
17
81
11
50
48
2
2
46
1.27
169147--169230
43
2.0
43
92
0
141
42
9
10
36
1.72
169582--169628
16
2.9
16
75
9
51
42
17
19
21
1.89
173103--173144
19
2.2
18
84
16
50
30
2
7
59
1.37
174124--174157
2
17.5
2
93
6
61
47
0
0
52
1.00
174817--174870
18
3.1
17
76
10
56
48
3
0
48
1.19
176216--176261
16
2.8
16
80
6
56
41
0
10
47
1.38

Tables:   1

The End!