Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012636.1 Kokia drynarioides strain JFW-HI SEQ_127645, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55550

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3119--3183
17
3.8
17
72
8
51
36
1
7
53
1.39
3153--3189
18
2.1
18
89
0
56
43
0
2
54
1.14
3117--3183
34
1.9
34
87
3
98
37
1
8
52
1.42
4982--5106
30
4.2
29
82
14
150
36
29
1
32
1.67
4978--5106
59
2.2
58
84
13
158
34
31
1
32
1.67
5163--5266
30
3.5
30
85
2
147
36
29
1
31
1.69
5163--5291
59
2.2
57
90
2
195
34
30
3
32
1.73
5217--5300
30
2.9
28
80
7
80
30
30
5
32
1.82
16191--16227
18
2.1
18
100
0
74
43
0
0
56
0.99
16194--16234
18
2.3
18
91
4
66
48
0
0
51
1.00
18076--18384
29
10.4
29
72
5
242
35
27
3
32
1.75
18085--18481
59
6.7
59
80
6
351
34
27
4
34
1.76
24822--25027
112
1.8
114
85
2
290
32
17
24
25
1.97
24922--25467
205
2.7
205
87
1
765
34
21
22
21
1.97
25844--25923
17
4.7
17
89
3
117
43
0
3
52
1.19
25879--25936
10
5.8
10
74
22
59
44
0
1
53
1.10
25844--25929
6
15.0
6
71
22
69
44
0
3
52
1.18
25889--25936
23
2.1
22
92
7
78
45
0
2
52
1.12
27854--28025
30
5.8
29
80
10
186
34
29
3
31
1.74
27829--28175
59
5.9
58
74
10
237
32
29
4
33
1.79
27832--28112
29
9.6
28
68
17
108
33
27
4
34
1.79
34885--35069
96
1.9
96
82
6
232
35
15
18
30
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35390--35474
28
3.0
28
81
10
91
36
4
22
36
1.75
35440--35524
30
2.9
29
77
6
91
42
3
20
34
1.69
36568--36603
12
3.0
12
87
0
54
41
2
0
55
1.14
36548--36601
15
3.5
15
82
9
56
44
1
0
53
1.11
37264--37341
17
4.6
17
80
0
84
57
7
1
33
1.35
37360--37397
16
2.4
16
90
0
58
21
18
34
26
1.96
37368--37399
16
2.0
16
100
0
64
25
12
31
31
1.92
37782--38040
30
8.6
30
81
4
265
37
1
25
35
1.67
37824--38027
58
3.5
58
84
7
234
35
0
25
37
1.63
37797--38033
88
2.7
89
82
3
226
36
1
25
36
1.66
38749--38779
2
15.5
2
100
0
62
48
0
0
51
1.00
40684--40763
3
26.7
3
100
0
160
0
33
0
66
0.92
54765--54826
6
10.7
6
76
13
67
41
1
3
53
1.27
54765--54824
23
2.6
23
86
0
84
41
1
3
53
1.27

Tables:   1

The End!