Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001264.1 Kokia drynarioides strain JFW-HI SEQ_112640, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  110758

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13581--13889
151
2.0
151
99
0
609
33
18
16
31
1.93
26123--26183
22
2.8
22
80
7
70
52
1
1
44
1.20
26134--26184
21
2.4
22
83
3
59
52
1
1
43
1.23
26344--26403
30
2.0
30
93
0
102
40
13
0
46
1.43
29657--29690
16
2.1
16
94
0
59
35
0
32
32
1.58
45445--45501
29
1.9
30
89
3
89
50
10
5
33
1.59
54222--54274
26
2.0
25
82
13
63
39
3
11
45
1.58
55206--55233
2
14.0
2
100
0
56
50
0
0
50
1.00
64376--64420
21
2.1
22
87
4
65
26
0
0
73
0.84
64467--64504
19
2.0
19
94
0
67
39
15
7
36
1.77
67217--67245
2
14.5
2
100
0
58
51
0
0
48
1.00
78239--78269
2
15.5
2
100
0
62
0
51
0
48
1.00
78649--78700
15
3.5
15
83
0
59
0
17
32
50
1.47
78661--78700
12
3.3
12
82
0
53
0
20
32
47
1.50
78652--78700
18
2.7
18
87
0
71
0
18
32
48
1.48
80748--80785
20
1.9
20
88
0
58
39
2
13
44
1.57
84083--84147
22
2.9
22
66
11
60
43
3
10
43
1.55
84084--84154
21
3.2
22
69
11
65
45
1
11
42
1.48
85058--85098
21
1.9
21
85
5
55
34
0
4
60
1.18
93830--93884
25
2.1
27
90
6
87
47
0
12
40
1.42
97849--97889
19
2.2
19
86
0
55
63
4
7
24
1.40
98468--98550
20
4.0
20
78
13
60
9
3
16
69
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98470--98515
24
1.9
24
86
8
67
10
4
13
71
1.27
98477--98534
21
2.8
20
84
7
64
8
3
15
72
1.23
98442--98534
44
2.1
44
84
4
116
8
6
16
68
1.36
99056--99115
31
2.1
28
79
14
68
65
0
0
35
0.93
99624--99673
23
2.2
23
96
0
91
46
4
14
36
1.63
99624--99680
23
2.5
23
91
0
78
49
3
12
35
1.58
109071--109138
29
2.3
29
89
0
100
32
19
17
30
1.95

Tables:   1

The End!