Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012647.1 Kokia drynarioides strain JFW-HI SEQ_127657, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44422

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5601--5642
21
2.0
21
90
0
66
52
16
11
19
1.74
6239--6268
15
2.0
15
93
0
51
30
0
0
70
0.88
9780--9804
7
3.6
7
100
0
50
16
40
0
44
1.47
9828--9873
11
4.1
11
78
15
58
67
0
2
30
1.03
17901--17934
17
2.0
18
88
11
54
52
0
0
47
1.00
21682--21717
9
4.0
9
86
13
56
19
0
2
77
0.88
21683--21738
23
2.4
22
80
11
58
21
3
1
73
1.08
27560--27630
29
2.4
29
81
11
90
35
5
30
28
1.80
27611--27652
21
2.0
21
90
0
66
35
16
30
16
1.92
27675--27941
29
9.2
28
78
12
238
34
1
27
36
1.68
27675--27948
58
4.7
57
78
12
263
33
1
27
36
1.68
29409--29520
17
6.4
17
71
16
70
54
6
0
38
1.32
29409--29492
6
14.2
6
69
10
57
54
4
1
39
1.29
29409--29457
18
2.8
18
84
3
64
53
4
0
42
1.20
29438--29520
23
3.6
23
64
6
60
56
6
1
36
1.32
29424--29492
18
3.6
18
75
17
66
56
2
1
39
1.23
30197--30769
39
14.7
38
69
9
289
25
19
29
25
1.99
30175--30769
78
7.6
78
82
3
626
26
19
29
25
1.98
39257--39700
29
15.2
29
76
10
241
36
2
25
36
1.70
39257--39317
28
2.1
29
81
3
70
37
8
24
29
1.84
39339--39700
59
6.2
58
78
12
271
35
1
25
37
1.66
39334--39658
88
3.7
87
78
6
275
35
1
25
37
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39334--39718
29
13.1
30
76
11
280
34
2
25
37
1.68
41184--41323
17
8.1
17
76
7
86
53
5
0
40
1.30
41197--41295
6
17.0
6
71
10
80
54
3
1
41
1.22
41197--41295
11
8.5
12
71
10
80
54
3
1
41
1.22
41184--41323
52
2.7
51
78
9
158
53
5
0
40
1.30
41210--41295
41
2.1
41
88
0
127
55
2
1
40
1.20
41228--41279
23
2.2
24
93
3
88
53
0
0
46
1.00
41240--41289
23
2.2
23
85
0
64
60
2
0
38
1.09
41257--41329
29
2.5
28
78
8
76
57
6
0
35
1.25
42921--43127
59
3.5
59
87
1
317
28
5
33
32
1.80
42924--43127
30
7.0
29
75
16
197
28
4
33
32
1.79
44278--44321
7
6.1
7
80
15
54
40
0
2
56
1.11

Tables:   1

The End!