Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012670.1 Kokia drynarioides strain JFW-HI SEQ_127681, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  104971

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
385--427
21
2.1
21
86
4
61
60
11
0
27
1.31
807--845
4
9.8
4
83
10
53
0
23
0
76
0.78
762--845
21
3.9
21
73
13
73
1
29
0
69
0.97
1185--1209
11
2.3
11
100
0
50
84
0
0
16
0.63
4328--4373
24
2.0
24
86
4
67
34
10
8
45
1.70
7080--7108
15
1.9
15
100
0
58
89
0
10
0
0.48
11096--11134
11
3.5
11
83
13
53
28
0
0
71
0.86
11122--11175
18
2.9
19
80
5
65
35
5
0
59
1.21
11328--11370
18
2.4
18
80
3
52
37
2
9
51
1.47
12914--12959
24
2.0
23
86
4
65
30
0
2
67
1.03
12919--12961
15
2.7
15
85
7
50
34
0
2
62
1.08
14899--14949
24
2.1
24
96
0
93
37
5
35
21
1.78
16735--16789
2
27.5
2
100
0
110
50
0
0
49
1.00
20470--20511
14
2.9
14
80
16
50
47
7
0
45
1.30
21503--21548
20
2.3
20
100
0
92
10
45
19
23
1.82
28853--29089
90
2.6
90
93
0
411
37
13
26
21
1.91
33119--33152
7
4.9
7
100
0
68
29
14
26
29
1.95
41394--41419
13
2.0
13
100
0
52
69
0
0
30
0.89
44286--44359
28
2.7
26
73
19
78
35
4
4
56
1.37
45581--45613
17
1.9
17
88
11
50
36
0
3
60
1.12
63925--64005
41
1.9
43
82
5
103
51
2
2
43
1.28
66216--66271
28
2.0
28
100
0
112
39
7
14
39
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72879--72929
25
2.0
25
92
0
84
37
19
9
33
1.85
74002--74078
21
3.7
21
82
0
82
29
27
11
31
1.92
77943--77968
3
8.7
3
100
0
52
69
0
30
0
0.89
79023--79058
8
4.4
8
89
3
54
50
0
0
50
1.00
79023--79081
16
3.5
17
75
8
59
54
0
0
45
0.99
79696--79763
33
2.1
33
97
0
127
25
8
7
58
1.54
80835--80872
19
2.0
20
84
5
51
18
0
7
73
1.06
84889--84940
23
2.3
23
83
6
61
57
7
11
23
1.59
85818--86046
41
5.5
41
82
3
235
25
25
11
37
1.89
85816--86046
83
2.8
82
86
6
304
25
25
11
38
1.89
91302--91349
21
2.3
22
79
17
57
68
4
10
16
1.33
92351--92375
3
8.3
3
100
0
50
0
32
0
68
0.90
95956--95987
6
5.3
6
100
0
64
18
15
0
65
1.27
102809--102838
15
1.9
16
93
6
53
40
16
16
26
1.90

Tables:   1

The End!