Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012681.1 Kokia drynarioides strain JFW-HI SEQ_127692, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  127815

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4730--4759
14
2.1
14
93
0
51
20
10
0
70
1.16
6233--6358
23
5.5
23
85
0
153
45
24
18
11
1.83
11593--11663
35
2.0
35
100
0
142
23
28
14
33
1.94
13533--13681
23
6.5
23
85
5
194
44
24
17
14
1.85
18902--18934
16
1.9
18
88
11
52
66
0
6
27
1.15
18863--19063
108
1.8
111
82
8
259
55
7
6
29
1.55
19942--20022
31
2.7
29
83
9
83
30
14
7
46
1.72
27706--27860
80
1.9
80
89
2
240
21
21
25
31
1.98
28870--28990
59
2.1
59
96
0
224
28
12
17
42
1.85
29713--29757
13
3.5
13
87
0
63
35
15
2
46
1.58
42468--42510
19
2.3
19
80
12
52
32
0
2
65
1.06
43715--43842
59
2.1
61
82
5
154
26
9
10
53
1.64
44048--44156
58
1.9
57
84
5
148
55
10
6
27
1.57
44109--44171
30
2.1
30
91
2
101
58
7
4
28
1.47
61376--61427
25
2.0
28
85
11
74
63
5
0
30
1.18
67686--67710
3
8.3
3
100
0
50
32
0
0
68
0.90
83140--83347
55
3.8
55
73
13
162
40
12
12
34
1.81
85045--85085
22
1.9
21
85
5
55
36
12
12
39
1.80
86173--86216
2
22.5
2
81
4
54
52
4
0
43
1.22
87892--87931
21
2.0
19
90
9
62
30
20
0
50
1.49
96174--96200
6
4.5
6
100
0
54
37
0
48
14
1.45
96300--96324
13
1.9
13
100
0
50
40
0
12
48
1.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
101126--101183
31
1.9
31
86
10
84
48
6
8
36
1.61
101126--101183
30
1.9
30
86
10
82
48
6
8
36
1.61
107554--107610
20
3.0
20
74
23
59
50
0
1
47
1.11
107563--107635
29
2.4
31
93
4
123
52
0
1
46
1.09
107563--107642
30
2.7
29
83
9
99
50
0
1
48
1.08
108125--108169
19
2.4
19
81
7
56
37
0
4
57
1.19
108970--109029
21
2.8
22
90
5
88
15
10
1
73
1.17
109348--109374
14
1.9
14
100
0
54
11
0
0
88
0.50
119224--119256
3
11.0
3
100
0
66
66
0
0
33
0.92
126678--126734
22
2.5
22
85
2
78
38
24
22
14
1.91
126649--126798
23
6.5
22
81
9
124
40
20
26
13
1.89
126649--126798
46
3.2
44
75
14
142
40
20
26
13
1.89

Tables:   1

The End!