Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012682.1 Kokia drynarioides strain JFW-HI SEQ_127693, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91570

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1249--1359
17
6.4
17
78
5
123
54
4
0
39
1.27
1249--1312
6
11.0
6
75
12
53
54
4
1
39
1.31
1249--1359
35
3.2
34
83
5
132
54
4
0
39
1.27
1707--1771
9
6.7
10
73
19
50
33
1
1
63
1.13
1700--1752
20
2.7
19
80
13
63
30
1
0
67
1.01
3738--3769
5
6.4
5
100
0
64
0
0
62
37
0.95
9591--9847
135
1.9
136
93
0
417
34
16
10
38
1.84
11144--11175
12
2.7
12
95
0
55
25
0
9
65
1.22
15556--15601
20
2.3
20
80
0
56
58
2
0
39
1.10
15588--15625
18
2.2
18
86
13
53
44
0
10
44
1.38
22260--22301
12
3.6
12
77
6
50
40
21
14
23
1.90
22255--22324
23
3.0
23
87
2
104
41
17
12
28
1.86
30599--30666
32
2.1
32
100
0
136
47
8
14
29
1.75
31305--31524
109
2.0
109
98
0
422
33
20
10
35
1.87
31957--31988
3
10.7
3
93
0
55
28
0
37
34
1.57
35077--35116
20
2.0
20
85
0
53
37
7
15
40
1.75
40648--40700
23
2.4
21
79
17
54
75
1
3
18
1.05
40648--40697
24
2.2
22
82
7
55
76
2
4
18
1.04
78640--78687
10
4.8
10
80
16
55
35
0
2
62
1.07
78640--78687
20
2.4
20
96
0
87
35
0
2
62
1.07
79022--79066
22
2.1
22
91
4
74
44
6
4
44
1.50
79448--79495
11
4.2
11
77
17
53
37
2
0
60
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79694--79750
26
2.2
28
75
18
68
54
5
10
29
1.56
79706--79763
26
2.2
26
96
0
107
56
12
10
20
1.64
84561--84663
53
1.9
53
98
0
197
35
8
30
25
1.86
86533--86572
18
2.3
18
82
4
55
40
0
2
57
1.12
89454--89496
19
2.3
19
100
0
86
27
27
18
25
1.98
90698--90736
6
6.5
6
87
0
51
23
30
0
46
1.53

Tables:   1

The End!