Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012683.1 Kokia drynarioides strain JFW-HI SEQ_127694, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83295

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1142--1205
6
10.8
6
71
15
53
46
3
0
50
1.17
1142--1205
17
3.6
17
82
12
76
46
3
0
50
1.17
1130--1219
36
2.6
35
81
15
105
44
3
1
51
1.25
1135--1219
17
4.9
16
71
24
66
43
3
1
51
1.26
2197--2662
30
15.8
29
78
6
402
34
28
3
33
1.74
2206--2662
59
7.7
58
80
7
422
35
28
3
33
1.74
2920--3103
95
1.9
94
83
6
237
30
17
14
36
1.90
6931--6973
22
2.0
21
82
13
52
44
11
30
13
1.80
11446--11475
15
2.0
15
100
0
60
26
26
26
20
1.99
14324--14532
116
1.8
116
86
4
305
37
21
19
21
1.94
14491--15090
205
2.9
205
86
0
795
36
19
22
22
1.95
15466--15538
11
6.2
12
72
15
71
39
4
1
54
1.28
15466--15538
6
12.3
6
75
13
71
39
4
1
54
1.28
15457--15534
17
4.4
18
87
9
115
39
3
1
55
1.26
15457--15534
36
2.2
35
90
6
122
39
3
1
55
1.26
15466--15546
17
4.0
22
73
25
63
40
3
2
53
1.32
15503--15559
23
2.6
22
83
10
64
43
3
3
49
1.36
16320--16351
16
2.0
16
93
0
55
62
3
0
34
1.11
16855--16932
36
2.2
36
97
0
147
19
26
23
30
1.98
17345--17633
57
5.0
57
80
9
275
33
30
4
31
1.79
17350--17632
29
9.7
29
76
10
256
34
29
4
31
1.78
17617--17681
28
2.2
29
81
5
78
32
30
9
27
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23282--23312
15
2.1
15
93
0
53
12
16
19
51
1.76
27016--27061
17
2.6
17
83
10
58
32
10
8
47
1.69
27868--27963
40
2.5
38
78
11
106
50
1
4
44
1.28
27870--27963
39
2.4
37
78
13
100
50
1
4
44
1.28
32570--32596
4
6.8
4
100
0
54
25
0
22
51
1.48
32752--32778
4
6.8
4
100
0
54
25
0
22
51
1.48
34933--34978
11
4.2
11
80
0
56
69
4
2
23
1.17
35492--35525
18
1.9
18
88
5
52
47
2
0
50
1.16
35971--36001
15
2.1
15
93
0
53
38
9
0
51
1.35
35992--36026
16
2.1
17
94
5
63
51
0
0
48
1.00
36007--36047
20
2.0
20
95
0
73
53
0
0
46
1.00
36460--36514
23
2.4
23
93
0
92
67
5
0
27
1.12
36551--36586
16
2.2
17
90
5
56
63
2
0
33
1.08
36546--36586
16
2.5
16
84
4
55
58
4
0
36
1.20
36920--37028
28
3.7
29
72
15
98
30
8
4
56
1.49
37566--37628
16
4.0
16
75
17
69
39
1
1
57
1.18
37589--37619
15
2.1
15
94
5
55
38
0
0
61
0.96
37782--37832
15
3.4
15
83
8
68
68
5
0
25
1.12
37773--37845
29
2.4
31
84
11
98
67
4
1
27
1.17
37776--37819
14
3.1
14
87
6
70
72
2
0
25
0.96
44120--44163
21
2.1
21
83
8
54
36
6
2
54
1.40
44648--44684
15
2.6
14
87
8
56
8
5
0
86
0.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66001--66047
16
2.9
16
75
12
51
51
0
29
19
1.47

Tables:   1

The End!