Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012687.1 Kokia drynarioides strain JFW-HI SEQ_127698, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28474

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2682--2784
23
4.4
23
83
7
109
44
19
23
12
1.85
2675--2804
23
5.6
23
80
8
102
43
16
24
14
1.86
5976--6174
29
6.8
28
78
10
143
35
3
24
36
1.71
6032--6222
59
3.2
59
80
7
192
38
3
21
36
1.72
6003--6223
29
7.5
28
80
8
156
37
3
23
36
1.71
6063--6228
59
2.8
59
81
3
199
40
2
19
36
1.65
8406--8462
20
2.8
20
81
5
71
36
17
31
14
1.89
10789--10850
23
2.6
23
89
5
79
62
9
4
22
1.44
10802--10850
23
2.1
23
96
0
89
61
8
6
24
1.47
11109--11170
23
2.6
24
82
7
81
61
9
4
24
1.47
12640--13451
268
3.0
268
95
2
1437
43
16
13
26
1.85
18838--18950
40
2.8
41
81
5
133
33
26
15
23
1.95
18839--18964
40
3.2
39
79
4
119
31
28
15
23
1.96
21780--21983
29
7.0
29
79
5
187
42
18
8
30
1.80
21784--21983
58
3.4
58
81
4
215
43
17
8
31
1.79
21781--21946
29
5.7
29
84
2
190
40
19
8
31
1.81
25546--25708
47
3.5
46
82
0
173
18
19
27
34
1.95
25688--25803
40
2.9
39
78
6
108
21
21
27
29
1.99
26984--27038
17
3.3
17
84
2
76
40
1
1
56
1.21
27145--27195
17
2.9
17
82
8
59
47
0
5
47
1.26
27265--27303
15
2.5
16
83
8
53
41
33
12
12
1.82
27921--27952
3
11.0
3
93
6
57
68
0
0
31
0.90

Tables:   1

The End!