Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012721.1 Kokia drynarioides strain JFW-HI SEQ_127732, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58983

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1773--1902
45
2.9
45
83
0
170
34
27
20
17
1.95
2176--2251
28
2.8
27
80
6
64
47
23
5
23
1.72
6072--6132
4
14.8
4
79
6
68
0
31
1
67
1.01
6072--6132
21
3.0
21
76
9
54
0
31
1
67
1.01
7548--7591
19
2.5
17
81
7
52
27
15
11
45
1.81
8641--8731
27
3.4
27
98
0
173
37
7
12
42
1.71
10768--10825
29
2.1
28
83
6
73
60
1
13
24
1.43
11091--11129
16
2.4
16
87
8
53
17
33
0
48
1.48
14971--15000
15
1.9
15
93
6
51
46
3
0
50
1.18
14970--15013
17
2.7
15
82
10
52
43
6
2
47
1.42
18852--18890
14
2.7
15
84
8
53
30
2
0
66
1.05
28701--28750
11
4.5
11
89
0
64
66
10
6
18
1.42
28709--28769
11
5.6
11
86
3
70
62
8
11
18
1.53
28701--28776
22
3.5
21
76
5
62
64
7
10
17
1.48
29499--29531
13
2.6
13
90
4
50
36
0
0
63
0.95
36046--36141
41
2.3
41
89
0
138
32
5
25
37
1.78
41947--41982
2
18.0
2
88
11
56
47
0
2
50
1.15
41949--41974
13
2.0
13
100
0
52
46
0
0
53
1.00
41947--41982
15
2.4
15
95
0
63
47
0
2
50
1.15
41947--41982
11
3.0
12
88
12
56
47
0
2
50
1.15
46224--46495
142
1.9
142
88
3
413
23
15
20
40
1.91
52976--53035
21
2.9
20
72
16
59
58
1
1
38
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53422--53459
16
2.3
16
86
13
51
84
0
0
15
0.63

Tables:   1

The End!