Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01001274.1 Kokia drynarioides strain JFW-HI SEQ_112661, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 758

Length: 1264
ACGTcount: A:0.33, C:0.15, G:0.18, T:0.35


Found at i:55 original size:3 final size:3

Alignment explanation


    Indices: 47--71  Score: 50
    Period size: 3  Copynumber: 8.3  Consensus size: 3

         37 CATAAAGCCG

                                             
         47 ATT ATT ATT ATT ATT ATT ATT ATT A
          1 ATT ATT ATT ATT ATT ATT ATT ATT A

         72 ATTTCCCATT


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   22  1.00

ACGTcount: A:0.36, C:0.00, G:0.00, T:0.64


Consensus pattern (3 bp):   
ATT

Done.