Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012744.1 Kokia drynarioides strain JFW-HI SEQ_127755, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  99215

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
275--353
37
2.1
37
97
0
149
27
17
16
37
1.91
3233--3494
43
6.1
43
86
1
285
23
13
30
32
1.93
3233--3494
85
3.1
84
83
4
294
23
13
30
32
1.93
3241--3492
128
2.0
128
84
3
337
23
13
30
32
1.93
10128--10167
18
2.2
18
86
4
53
65
2
2
30
1.19
10189--10233
9
5.0
9
89
8
65
66
11
0
22
1.22
11778--11885
54
2.0
54
98
0
207
21
16
25
37
1.94
17855--17895
18
2.3
19
79
12
50
48
2
0
48
1.14
35709--35867
34
4.6
34
80
0
156
45
6
22
25
1.75
35709--35835
51
2.5
51
93
1
218
47
7
21
24
1.75
35709--35855
17
8.6
17
76
0
141
46
6
21
25
1.75
52904--52942
6
6.5
6
82
11
53
17
5
12
64
1.46
56351--56406
20
2.9
19
76
21
55
53
0
1
44
1.11
56357--56398
20
2.0
21
90
9
68
50
0
0
50
1.00
56381--56431
16
3.4
16
69
20
56
54
0
0
45
0.99
56360--56431
29
2.5
29
95
2
128
54
0
0
45
0.99
57146--57227
39
2.2
39
84
8
107
50
0
0
50
1.00
57161--57241
21
4.0
21
71
16
73
49
0
0
50
1.00
58868--58937
30
2.3
30
100
0
140
38
7
15
38
1.75
68007--68207
79
2.5
79
87
1
278
34
14
9
40
1.80
72450--72499
21
2.2
23
82
10
59
32
4
18
46
1.67
75342--75408
33
2.0
33
97
0
125
17
28
2
50
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76211--76352
37
3.8
37
90
1
196
14
20
28
35
1.92
83709--83752
17
2.5
19
82
14
58
29
0
0
70
0.88
97357--97381
2
12.5
2
100
0
50
48
0
0
52
1.00
98050--98118
28
2.4
28
83
9
77
34
0
0
65
0.93

Tables:   1

The End!