Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012755.1 Kokia drynarioides strain JFW-HI SEQ_127766, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79150

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3776--3861
26
3.4
25
83
4
109
26
22
16
34
1.95
9211--9315
6
17.5
6
81
0
111
46
6
3
42
1.48
9213--9315
8
12.6
8
75
11
75
46
6
3
42
1.48
9211--9311
26
3.9
26
88
0
130
46
6
3
42
1.49
9416--9554
50
2.8
50
82
6
149
39
15
17
26
1.90
11932--11993
22
2.9
22
90
7
92
74
1
11
12
1.15
11958--11987
16
1.9
15
93
6
51
73
0
13
13
1.10
12791--12833
19
2.3
19
84
8
52
58
4
0
37
1.19
17029--17076
22
2.2
22
92
0
78
75
2
6
16
1.11
17889--17931
19
2.3
19
84
8
52
58
4
0
37
1.19
18722--18822
10
11.2
9
75
15
50
56
0
3
38
1.25
19050--19091
18
2.3
19
84
12
61
30
0
0
69
0.89
19458--19543
36
2.4
37
81
9
97
39
18
1
40
1.58
24071--24117
23
2.0
23
95
0
85
42
21
4
31
1.72
30518--30570
20
2.7
20
81
0
70
33
20
32
13
1.91
31405--31457
20
2.6
21
76
8
56
47
11
7
33
1.68
33317--33861
269
2.0
268
88
0
804
42
16
19
22
1.89
40227--40442
81
2.7
81
83
2
272
36
23
13
26
1.92
40228--40437
27
7.7
27
83
0
231
36
23
13
26
1.92
43293--43355
24
2.6
24
87
0
90
49
12
14
23
1.78
45283--45332
24
2.1
24
92
0
82
52
10
14
24
1.71
45495--45560
20
3.4
19
70
12
53
45
6
7
40
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47311--47380
34
2.1
34
91
0
113
28
15
14
41
1.86
47834--47889
22
2.6
21
75
8
58
39
17
5
37
1.73
51593--51641
23
2.1
24
96
3
91
34
20
12
32
1.90
52594--52652
30
2.0
30
86
0
82
28
22
13
35
1.92
56225--56287
27
2.3
27
91
0
90
22
3
9
65
1.37
57815--57863
16
3.3
16
67
21
52
26
8
4
61
1.42
59620--59659
21
1.9
21
85
10
55
47
12
2
37
1.55
60313--60355
18
2.4
17
81
11
50
44
2
2
51
1.27
62553--62593
17
2.4
17
95
0
73
36
4
24
34
1.77
69071--69402
120
2.8
118
78
8
361
38
16
19
25
1.92
69086--69402
59
5.3
59
74
6
244
39
16
20
23
1.92
73209--73528
49
6.5
49
77
6
342
20
28
15
35
1.93
73209--73520
148
2.1
148
78
7
330
19
28
16
35
1.94
73209--73528
98
3.3
98
91
4
527
20
28
15
35
1.93
74929--75014
17
5.2
17
86
6
106
41
0
6
51
1.29
75050--75101
15
3.5
15
94
0
95
40
25
13
21
1.89
75050--75109
30
2.0
30
87
6
86
40
28
11
20
1.87
76852--77372
59
8.9
59
83
5
556
33
30
3
32
1.75
76862--77372
176
2.9
177
85
5
653
33
30
3
32
1.75
76852--77271
30
14.2
29
71
18
237
35
30
2
31
1.71
76854--77367
30
17.5
29
67
19
162
34
29
3
32
1.75

Tables:   1

The End!