Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012775.1 Kokia drynarioides strain JFW-HI SEQ_127787, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89748

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
481--779
30
10.1
30
78
10
310
29
2
30
37
1.70
481--779
60
5.0
59
84
4
377
29
2
30
37
1.70
484--770
89
3.2
88
84
7
359
29
2
31
37
1.69
2718--2781
6
11.2
6
76
15
64
51
3
1
43
1.26
2704--2813
35
3.1
35
80
8
125
51
4
2
40
1.36
2686--2813
17
7.4
16
73
19
98
50
4
2
42
1.36
3577--3646
35
2.0
34
88
2
104
35
15
11
37
1.84
3963--4003
22
2.0
21
85
9
57
46
0
2
51
1.14
5216--5272
27
2.1
28
90
3
89
22
28
10
38
1.87
16587--16734
73
2.0
73
100
0
296
23
22
13
39
1.90
28759--28809
19
2.5
20
78
12
59
54
1
3
39
1.30
29621--29744
37
3.4
37
69
20
116
39
3
20
37
1.69
29658--29770
36
3.1
36
67
20
108
34
7
18
39
1.78
29621--29770
73
2.1
73
100
0
300
36
5
19
38
1.74
30398--30429
2
16.0
2
100
0
64
0
0
50
50
1.00
33602--33640
17
2.3
17
86
0
51
15
10
25
48
1.76
34876--34916
16
2.6
15
88
7
55
31
0
0
68
0.90
37725--37778
20
2.7
20
82
0
63
31
31
9
27
1.88
41431--41580
48
3.2
45
78
13
151
38
19
28
14
1.90
41459--41580
23
5.2
23
79
16
135
38
22
27
11
1.88
43933--44148
41
5.2
41
87
4
276
25
24
11
38
1.88
54762--54797
2
18.0
2
94
0
63
47
0
0
52
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55175--55216
3
14.0
3
94
0
75
30
0
33
35
1.58
55176--55222
9
5.2
9
94
0
58
25
2
34
38
1.68
57319--57348
2
15.0
2
100
0
60
50
0
0
50
1.00
76656--76688
16
2.1
16
88
11
50
51
9
0
39
1.34
77677--77716
13
2.9
15
75
17
50
65
10
5
20
1.42
79384--79437
25
2.1
26
83
10
67
70
1
14
12
1.25
85487--85535
16
3.1
16
75
0
53
48
18
14
18
1.80
85829--85904
31
2.4
31
80
8
82
55
1
1
42
1.16

Tables:   1

The End!