Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012780.1 Kokia drynarioides strain JFW-HI SEQ_127792, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  123354

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4613--4664
17
3.0
17
71
2
50
46
5
3
44
1.45
7821--7873
15
3.3
15
80
14
70
43
0
0
56
0.99
7906--7942
16
2.3
16
86
13
58
40
0
0
59
0.97
8055--8079
13
1.9
13
100
0
50
40
0
0
60
0.97
18147--18256
38
3.0
38
82
4
136
30
22
15
30
1.95
32120--32512
29
13.3
29
75
11
257
35
25
3
35
1.72
32152--32542
57
6.7
57
76
11
244
35
25
3
35
1.73
32407--32600
29
6.7
29
73
11
139
31
27
5
35
1.79
32352--32601
29
8.7
29
70
16
137
32
26
4
36
1.76
32347--32601
57
4.4
57
78
11
211
32
26
4
36
1.76
35519--35675
60
2.6
57
92
7
235
52
8
3
35
1.47
35540--35675
60
2.3
59
98
1
263
51
8
2
36
1.48
41947--41992
22
2.0
24
83
8
60
60
4
2
32
1.28
42988--43149
35
4.6
35
81
6
175
38
14
21
25
1.91
43825--43865
2
20.5
2
100
0
82
0
48
0
51
1.00
47145--47181
18
2.1
18
94
0
65
48
0
24
27
1.51
50125--50169
16
2.8
16
83
9
56
62
0
20
17
1.33
55166--55216
11
4.6
11
82
0
66
41
19
1
37
1.63
55145--55210
20
3.2
20
82
4
69
39
22
4
33
1.75
55162--55216
22
2.6
22
85
5
78
40
20
1
38
1.63
57411--57480
29
2.3
30
85
4
97
31
7
17
44
1.75
57432--57491
29
2.1
29
80
0
66
28
6
16
48
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69168--69198
13
2.3
14
94
5
55
45
6
9
38
1.63
70112--70215
33
3.4
30
77
12
95
60
1
1
35
1.19
76573--76690
61
1.9
61
98
0
227
33
12
10
44
1.76
78601--78631
6
5.3
6
96
3
55
38
12
0
48
1.42
81667--81748
31
2.7
30
79
5
92
34
18
3
43
1.67
83928--83986
20
3.0
19
75
18
66
42
22
8
27
1.82
88254--88321
23
3.1
21
78
17
68
39
16
7
36
1.76
93343--93389
23
2.0
23
87
4
67
34
14
10
40
1.81
103239--103308
25
2.8
25
84
0
95
44
18
0
37
1.50
106882--106917
18
1.9
19
88
5
56
72
5
5
16
1.23
109598--109757
80
2.0
80
97
0
302
26
26
16
30
1.96
111006--111075
20
3.5
20
67
11
61
44
11
10
34
1.74
111008--111089
41
2.0
41
100
0
164
43
9
12
34
1.75
118143--118200
24
2.4
24
79
2
71
43
0
3
53
1.17
118651--118697
23
2.0
23
88
8
69
68
0
8
23
1.17

Tables:   1

The End!