Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012790.1 Kokia drynarioides strain JFW-HI SEQ_127803, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  173816

Tables:   1   

This is table  1  of  1  ( 59 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2509--2533
12
2.1
12
100
0
50
60
16
0
24
1.36
3213--3247
6
5.8
6
100
0
70
34
51
14
0
1.42
10961--10985
2
12.5
2
100
0
50
52
0
0
48
1.00
13376--13414
20
1.9
21
89
5
62
58
0
0
41
0.98
17159--17198
18
2.4
16
84
15
55
20
5
2
72
1.15
17853--17904
23
2.2
24
80
6
63
34
11
17
36
1.86
20149--20202
27
2.0
27
100
0
108
29
7
14
48
1.71
21327--21745
87
4.8
87
88
2
610
16
25
12
45
1.83
23743--23776
17
2.0
17
94
0
59
67
0
29
2
1.05
33546--33581
18
2.0
18
100
0
72
44
0
22
33
1.53
34514--34600
21
4.5
21
64
21
55
49
16
6
27
1.71
35974--36009
2
18.5
2
94
5
65
50
0
0
50
1.00
35983--36025
14
2.9
14
86
6
50
53
2
0
44
1.13
38438--38488
16
3.1
16
75
24
52
41
1
1
54
1.22
63921--63980
22
2.8
22
85
9
72
71
1
11
15
1.22
63946--63975
15
1.9
16
93
6
53
70
0
13
16
1.18
64792--64834
19
2.3
19
84
8
52
58
4
0
37
1.19
80763--80922
71
2.2
71
77
6
162
48
13
6
32
1.67
80799--82096
71
18.1
71
71
10
685
45
13
7
33
1.70
80815--81220
144
2.8
148
78
8
379
45
12
5
36
1.66
81124--81927
143
5.6
141
80
5
600
46
13
6
33
1.70
80678--81857
214
5.5
214
74
7
739
46
13
6
33
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80818--81927
356
3.1
353
82
5
1245
46
13
6
33
1.69
80671--81927
285
4.4
282
75
6
937
46
13
6
33
1.70
81804--82072
145
1.9
144
81
2
333
46
12
8
32
1.71
82100--82239
71
2.0
70
81
4
165
48
10
5
35
1.60
81992--82193
109
1.9
108
87
3
298
44
11
8
35
1.72
85574--85607
17
1.9
17
88
5
50
79
2
8
8
1.03
90679--90735
19
3.0
19
82
14
73
38
0
3
57
1.16
90697--90809
20
5.7
20
75
15
83
37
1
4
56
1.30
90697--90759
22
3.0
21
82
13
60
39
1
3
55
1.25
90685--90809
58
2.2
57
81
8
146
37
1
4
56
1.30
90697--90809
21
5.7
20
76
17
76
37
1
4
56
1.30
91834--91858
5
5.0
5
100
0
50
0
80
0
20
0.72
96864--96905
22
1.9
22
85
0
57
40
0
4
54
1.21
117918--117998
41
2.0
41
85
0
108
24
3
8
62
1.40
117975--118000
12
2.2
12
100
0
52
23
0
7
69
1.14
127548--127582
18
2.0
17
94
5
61
5
11
2
80
1.00
128596--128627
5
6.2
5
96
3
55
3
0
37
59
1.13
128779--128843
3
21.0
3
73
17
53
1
33
4
60
1.27
128840--128881
6
7.0
6
100
0
84
16
50
0
33
1.46
134911--134963
22
2.5
21
78
3
52
67
3
1
26
1.17
134923--134971
21
2.3
23
79
13
59
63
4
0
32
1.13
136546--136585
15
2.7
15
88
7
55
65
17
7
10
1.46
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
136627--136671
21
2.1
22
83
4
56
73
13
2
11
1.19
136612--136681
22
3.1
22
78
9
70
72
15
2
8
1.20
136633--136681
22
2.3
21
89
3
71
71
16
4
8
1.26
152147--152181
4
9.0
4
93
6
63
74
0
25
0
0.82
152554--152596
21
2.1
21
86
4
61
25
2
13
58
1.48
153074--153122
16
3.2
16
75
16
59
59
6
0
34
1.22
153155--153249
30
3.2
30
67
8
86
36
5
12
45
1.65
155071--155207
45
3.0
45
86
2
168
31
26
21
21
1.98
155202--155244
21
2.0
21
86
0
59
23
34
16
25
1.95
155487--155540
14
3.9
13
79
11
54
48
25
3
22
1.67
155473--155551
28
2.9
28
84
1
79
50
24
3
21
1.65
159339--159397
4
14.2
4
78
7
55
1
32
0
66
1.02
160044--160101
16
3.4
17
86
11
66
70
0
0
29
0.87
160044--160101
17
3.4
17
85
7
73
70
0
0
29
0.87
170120--170173
29
2.0
26
82
10
63
51
0
3
44
1.19

Tables:   1

The End!