Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012820.1 Kokia drynarioides strain JFW-HI SEQ_127833, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23498

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
545--844
29
10.5
29
72
15
191
34
27
3
35
1.73
545--785
59
4.2
58
75
10
200
34
26
2
36
1.71
545--750
88
2.3
88
81
5
229
33
26
3
35
1.73
718--771
21
2.6
20
88
5
72
37
29
3
29
1.75
739--797
30
2.0
30
93
0
100
40
28
1
28
1.66
634--843
109
1.9
109
84
3
280
34
27
3
34
1.74
4950--4992
22
2.0
21
82
13
52
44
11
30
13
1.80
10389--10892
29
17.1
29
79
11
397
32
3
28
35
1.74
10377--10913
59
9.1
59
84
7
565
33
3
27
35
1.74
10452--10916
30
15.8
28
76
11
193
33
2
28
35
1.71
11961--12068
3
34.0
3
69
14
56
34
3
2
59
1.30
11961--12068
19
5.7
18
74
21
87
34
3
2
59
1.30
11965--12025
13
4.8
13
81
2
70
34
3
1
60
1.23
11992--12070
16
4.9
16
72
9
61
35
3
2
58
1.30
12788--12844
17
3.3
17
82
2
60
50
1
3
43
1.29
13871--14437
205
2.8
205
91
0
938
36
20
21
21
1.96
14298--14665
119
3.1
119
88
0
549
35
20
21
22
1.96
15119--15210
6
15.8
6
75
6
73
46
0
3
50
1.17
15149--15222
18
4.1
18
72
10
53
51
1
2
44
1.24
15102--15223
17
6.9
18
74
12
76
45
0
4
49
1.26
15938--15990
7
8.2
6
80
12
52
58
0
0
41
0.98
15938--15990
3
16.3
3
81
14
52
58
0
0
41
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15938--15990
10
5.7
10
80
17
69
58
0
0
41
0.98
15939--15979
17
2.4
17
100
0
82
58
0
0
41
0.98
17135--17365
30
7.8
30
86
5
283
35
27
2
34
1.71
17682--17867
96
1.9
96
83
6
243
29
17
15
38
1.90
20907--20952
16
3.0
15
78
6
56
41
2
2
54
1.25

Tables:   1

The End!