Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012852.1 Kokia drynarioides strain JFW-HI SEQ_127866, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59777

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12209--12279
37
1.9
37
86
11
101
39
1
2
56
1.23
26787--26820
12
2.8
12
86
0
50
64
0
32
2
1.08
26869--26954
42
2.1
41
93
4
154
36
11
30
20
1.89
27184--27239
27
2.1
27
100
0
112
37
37
10
14
1.81
27297--27329
17
1.9
18
88
11
52
12
9
12
66
1.44
30680--30813
40
3.3
40
75
8
128
41
14
17
26
1.89
30870--30986
40
2.9
40
85
0
144
41
11
27
19
1.87
31854--32114
135
1.9
135
93
1
452
32
13
19
34
1.91
33355--33409
20
2.8
20
100
0
110
45
0
0
54
0.99
33361--33407
12
4.2
12
76
20
57
44
0
0
55
0.99
34141--34235
43
2.2
43
92
1
156
28
20
27
24
1.99
35342--35366
12
2.1
12
100
0
50
8
24
8
60
1.52
35446--35493
24
2.0
25
84
12
64
58
2
6
33
1.35
36243--36275
9
3.7
9
84
15
50
33
0
0
66
0.92
36499--36573
34
2.3
33
86
9
100
34
1
16
48
1.54
40108--40144
14
2.8
14
88
8
51
45
2
2
48
1.30
40173--40206
10
3.6
9
88
11
50
76
2
0
20
0.92
47288--47321
13
2.7
13
90
4
52
67
0
0
32
0.91
48071--48107
19
1.9
19
94
0
65
29
0
0
70
0.88
48946--48993
18
2.8
18
81
15
57
64
0
0
35
0.94
48964--49009
23
2.1
22
88
8
67
67
0
0
32
0.91
48952--49006
18
2.8
19
73
19
51
65
0
0
34
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48994--49045
21
2.4
21
93
3
86
51
0
0
48
1.00
50687--50715
14
2.0
15
93
6
51
48
13
10
27
1.75
52950--53010
32
1.9
32
90
6
97
26
31
18
24
1.97
53340--53388
20
2.7
18
75
12
55
46
4
0
48
1.20
56109--56142
18
1.9
18
88
5
52
55
8
29
5
1.54

Tables:   1

The End!