Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: NTFQ01012860.1 Kokia drynarioides strain JFW-HI SEQ_127874, whole genome shotgun sequence Parameters: 2 7 7 80 10 50 1000 Length: 42342

Tables:   1   

This is table  1  of  1  ( 29 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6166--6238
36
2.0
36
100
0
146
30
8
5
56
1.51
9565--9603
20
2.0
20
90
10
62
76
10
0
12
1.01
9636--9682
18
2.6
18
73
6
51
44
34
0
21
1.52
10894--10923
14
2.1
14
93
0
51
10
3
0
86
0.67
15049--15087
8
4.8
8
84
6
51
82
0
17
0
0.68
15772--15873
9
11.4
9
71
10
75
80
0
18
0
0.77
15780--15875
7
13.7
7
80
13
101
79
0
19
1
0.80
15773--15875
47
2.2
47
83
11
122
79
0
19
0
0.79
15772--15872
36
3.0
32
83
15
91
80
0
18
0
0.77
16886--17139
49
5.1
49
70
3
161
37
15
27
19
1.92
16828--17749
99
9.3
99
79
5
771
36
15
27
20
1.93
16917--17548
50
12.8
49
68
7
310
35
15
28
20
1.93
17796--17907
51
2.3
49
80
9
122
37
15
24
23
1.93
18046--18349
114
2.7
113
86
3
387
34
18
24
23
1.96
18255--18549
96
3.1
95
90
3
468
32
16
27
23
1.96
18447--18663
114
1.9
113
91
0
353
33
15
26
24
1.95
18353--18868
215
2.4
212
82
3
630
33
15
26
24
1.95
19701--19735
15
2.3
15
90
0
52
20
0
0
80
0.72
20606--20666
25
2.4
25
81
5
79
29
8
3
59
1.43
24661--24737
38
2.0
38
92
0
127
19
15
24
40
1.90
38251--38402
60
2.5
59
84
7
171
40
2
2
54
1.28
38863--39054
96
2.0
96
81
6
228
33
13
22
30
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39267--39328
29
2.1
29
84
3
79
30
11
29
29
1.91
39267--39340
28
2.6
29
84
4
87
29
10
28
31
1.91
39334--39524
29
6.5
30
78
11
173
34
4
28
31
1.78
39346--39525
59
3.0
59
87
0
279
33
5
28
32
1.79
39355--39524
29
5.8
29
81
6
189
35
4
28
31
1.76
41454--41517
6
11.2
6
76
15
64
51
3
1
43
1.26
41422--41517
17
5.6
16
78
17
95
50
3
3
43
1.33

Tables:   1   

The End!