Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012874.1 Kokia drynarioides strain JFW-HI SEQ_127888, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  182654

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
316--366
16
3.2
16
74
0
57
23
23
5
47
1.73
14325--14479
23
6.7
23
78
12
156
10
23
23
43
1.84
14325--14479
71
2.2
69
84
8
190
10
23
23
43
1.84
14325--14437
48
2.4
48
85
10
155
9
23
24
41
1.85
14325--14478
48
3.3
45
83
10
145
10
23
23
42
1.84
15723--15773
24
2.1
24
96
0
93
23
11
9
54
1.66
16217--16259
16
2.8
16
86
10
54
53
2
0
44
1.13
22796--22871
16
4.6
17
73
11
68
35
3
2
57
1.31
24734--24762
3
9.7
3
100
0
58
68
0
0
31
0.89
26088--26154
30
2.2
31
84
7
84
50
17
10
20
1.75
25620--26312
348
2.0
348
97
0
1298
33
17
18
30
1.94
39273--39387
61
1.9
61
83
5
153
22
15
13
48
1.79
39573--39737
89
1.9
89
82
10
212
45
14
14
25
1.83
40717--40756
16
2.3
17
87
12
55
67
0
0
32
0.91
42964--43008
23
2.0
23
82
8
56
64
4
4
26
1.32
46512--46552
20
2.0
20
95
0
73
29
7
19
43
1.78
56098--56132
18
1.9
18
88
0
52
40
0
0
60
0.97
56066--56129
28
2.4
25
78
16
67
29
3
1
65
1.17
76769--76803
18
1.9
18
88
0
52
48
11
0
40
1.39
87208--87236
15
1.9
15
100
0
58
27
6
24
41
1.80
98853--98908
18
3.0
18
81
5
58
60
1
3
33
1.24
110199--110243
24
1.9
23
86
4
63
57
6
4
31
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112190--112268
28
2.7
28
75
7
77
56
5
8
29
1.51
112674--112736
24
2.7
24
75
2
74
50
6
1
41
1.37
113466--113490
3
8.3
3
100
0
50
32
0
0
68
0.90
113543--113625
41
2.0
41
92
0
139
28
9
9
51
1.66
122706--122842
42
3.3
42
80
5
152
28
24
21
26
1.99
127449--127497
26
1.9
25
87
4
71
38
0
6
55
1.25
136126--136196
32
2.2
32
85
2
90
61
1
0
36
1.05
141448--141481
17
2.0
17
88
0
50
82
2
11
2
0.89
152868--152921
27
2.0
27
88
0
81
35
12
12
38
1.82
153941--153967
3
9.0
3
100
0
54
66
0
0
33
0.92
155885--156130
130
1.9
131
97
0
467
31
19
11
37
1.87
158271--158329
29
2.0
30
83
9
77
57
5
1
35
1.31
158265--158349
41
2.1
41
84
4
109
57
7
1
34
1.33
159860--160023
86
1.9
86
93
0
283
41
12
25
20
1.88
171978--172021
9
4.7
9
79
20
54
61
0
0
38
0.96
175240--175280
14
2.8
15
85
7
57
56
7
0
36
1.27
175239--175280
22
1.9
22
85
0
57
54
7
0
38
1.28
176466--177034
283
2.0
283
98
0
1111
36
20
16
26
1.94

Tables:   1

The End!