Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012879.1 Kokia drynarioides strain JFW-HI SEQ_127893, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82685

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6509--6672
59
2.8
59
84
2
186
34
4
25
34
1.78
6509--6675
30
5.6
30
81
3
167
34
4
26
34
1.78
7213--7293
17
4.8
17
83
6
110
50
2
0
46
1.14
7209--7293
23
3.8
22
77
13
84
50
2
0
47
1.14
7209--7293
6
14.8
6
70
22
67
50
2
0
47
1.14
11128--11559
30
14.6
29
76
12
252
35
27
3
33
1.74
11141--11642
89
5.7
87
75
9
371
34
27
3
34
1.75
11113--11643
59
9.1
59
73
10
349
34
27
3
34
1.75
11184--11531
119
2.9
118
78
11
320
35
26
3
33
1.74
11143--11643
30
17.1
29
73
13
249
34
27
3
34
1.75
13532--13573
20
2.1
20
100
0
84
35
19
23
21
1.96
15388--15426
12
3.2
12
77
0
51
51
15
20
12
1.76
22997--23512
211
2.5
209
88
0
753
37
16
22
24
1.93
23312--23689
173
2.2
173
87
4
528
37
16
23
23
1.94
23697--23821
48
2.6
48
92
5
200
37
16
23
22
1.94
25005--25171
29
5.7
29
74
10
126
35
25
3
35
1.74
34465--34497
15
2.1
16
94
5
59
57
0
0
42
0.98
35177--35201
12
2.1
12
100
0
50
44
16
8
32
1.76
39208--39245
16
2.4
16
100
0
76
26
7
10
55
1.61
46139--46177
6
6.8
6
88
11
64
0
15
0
84
0.62
46139--46177
17
2.3
17
95
0
69
0
15
0
84
0.62
46139--46177
11
3.5
11
89
3
60
0
15
0
84
0.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58470--58512
21
2.1
20
91
4
68
0
27
2
69
1.00
58467--58508
11
4.1
10
82
11
50
0
28
2
69
1.01
59643--59744
48
2.2
47
80
7
109
26
16
21
35
1.95
61760--61803
18
2.4
19
82
17
58
45
0
34
20
1.51
64314--64664
69
5.1
69
77
1
326
34
21
19
24
1.96
64337--64660
138
2.3
138
81
2
400
35
22
18
23
1.96
64917--65176
56
4.7
56
76
5
215
36
18
13
30
1.90
72802--73044
121
2.0
121
97
0
459
23
25
16
34
1.95
75653--76092
193
2.3
194
83
3
528
27
18
26
27
1.98
79486--79930
193
2.3
194
81
6
467
27
16
26
29
1.97
81732--81768
18
2.1
18
89
0
56
24
27
0
48
1.51

Tables:   1

The End!