Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012892.1 Kokia drynarioides strain JFW-HI SEQ_127906, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47348

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
618--651
15
2.3
15
89
0
50
23
38
8
29
1.85
1517--1555
20
2.0
21
85
10
55
28
0
7
64
1.21
3109--3152
16
2.9
15
80
12
54
59
0
2
38
1.10
3605--3699
6
15.2
6
74
16
68
63
12
1
23
1.35
3616--3705
32
2.8
32
96
0
162
61
11
1
26
1.37
6563--6615
27
2.0
27
82
14
65
69
3
1
24
1.15
6563--6616
28
2.0
27
82
10
65
70
3
1
24
1.13
6663--6741
28
2.8
27
79
11
79
64
8
0
26
1.23
6868--6912
21
2.2
21
88
11
67
0
33
0
66
0.92
6873--6920
16
2.9
17
82
14
64
0
31
0
68
0.90
6877--6918
4
10.2
4
80
14
50
0
28
0
71
0.86
7409--7446
19
1.9
21
89
10
62
26
7
2
63
1.35
7748--7798
16
3.2
16
73
15
52
15
17
9
56
1.65
9895--9930
16
2.3
16
90
4
56
63
8
5
22
1.43
31816--31896
17
4.8
17
87
0
117
43
0
3
53
1.18
31816--31898
6
14.5
6
71
18
61
44
0
3
51
1.18
32111--32135
13
1.9
13
100
0
50
32
44
0
24
1.54
33663--34043
29
13.0
28
76
8
323
34
29
1
33
1.69
33663--34068
30
13.8
29
78
7
356
34
29
1
33
1.69
33663--34043
59
6.5
58
84
6
450
34
29
1
33
1.69
45267--45326
27
2.2
27
93
3
102
18
15
8
58
1.61
45900--46016
44
2.6
44
84
4
153
31
14
29
24
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45945--46310
204
1.8
199
82
6
477
37
18
22
21
1.94
46618--46667
17
2.9
17
78
0
55
40
0
8
52
1.31
46882--46906
13
1.9
13
100
0
50
32
44
0
24
1.54

Tables:   1

The End!