Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012895.1 Kokia drynarioides strain JFW-HI SEQ_127909, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37218

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
493--816
40
8.2
40
83
3
352
24
14
27
33
1.94
534--816
79
3.6
79
85
4
392
24
15
27
32
1.95
493--803
119
2.6
119
84
3
410
24
15
26
34
1.95
932--1166
50
4.7
50
77
2
175
20
22
21
35
1.96
12767--12942
30
5.9
30
81
5
203
34
4
20
40
1.73
12772--12938
90
1.9
90
87
2
246
35
3
20
40
1.70
12767--12941
60
2.9
60
83
0
233
34
4
20
41
1.71
12767--12952
90
2.1
91
82
5
234
33
4
20
40
1.74
13627--13799
55
2.9
59
80
12
196
50
2
0
46
1.20
13740--13767
14
2.0
14
100
0
56
28
0
0
71
0.86
13769--13821
28
1.9
27
88
3
79
77
0
1
20
0.87
13772--13821
18
2.8
18
82
14
59
78
0
2
20
0.86
25300--25339
19
2.2
18
86
4
53
60
7
15
17
1.57
25401--25451
24
2.1
24
85
7
68
70
3
0
25
1.04
25462--25515
16
3.4
16
80
7
56
72
3
3
20
1.16
25486--25515
14
2.1
15
93
6
53
76
0
0
23
0.78
26156--26186
16
1.9
16
93
0
53
48
16
0
35
1.46
26190--26219
6
5.0
6
100
0
60
50
50
0
0
1.00
33080--33133
21
2.5
22
79
11
67
61
3
0
35
1.14

Tables:   1

The End!